RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ANKRD19PQ9H560 264 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 TESQ9UGI8 421 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 CA5BQ9Y2D0 317 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 FFAR2O15552 330 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 GATCO43716 136 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 GALR3O60755 368 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 SOX30O94993 753 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 OTCP00480 354 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 HLA-DPA1P20036 260 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 ACHEP22303 614 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 THBS2P35442 1172 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 LIM2P55344 173 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 WNT4P56705 351 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 IL2P60568 153 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 C1DQ13901 141 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 HABP2Q14520 560 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 TRAM2Q15035 370 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 PCBP2Q15366 365 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■□□□□ 10.7
VAPB-201ENST00000265619 ZXDCQ2QGD7 858 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 PYHIN1Q6K0P9 492 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 ZCCHC12Q6PEW1 402 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 TRIM46Q7Z4K8 759 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 EIF4E3Q8N5X7 224 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 FBXO22Q8NEZ5 403 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 OR4D9Q8NGE8 314 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 LKAAEAR1Q8TD35 194 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 C7orf50Q9BRJ6 194 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 BTBD1Q9H0C5 482 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 C11orf49Q9H6J7 331 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 PRMT8Q9NR22 394 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 TLR8Q9NR97 1041 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 CYSLTR2Q9NS75 346 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 OR6C65A6NJZ3 312 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR2T1O43869 369 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 DPM1O60762 260 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 NDUFS3O75489 264 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 CELP19835 753 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 ACSL1P33121 698 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 RGS4P49798 205 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MINDY4Q4G0A6 757 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SYT14P1Q58G82 188 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MANEAQ5SRI9 462 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 C18orf63Q68DL7 685 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 FAM109BQ6ICB4 259 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 ANGPTL8Q6UXH0 198 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR4A15Q8NGL6 344 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR5M9Q8NGP3 310 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MRPS31Q92665 395 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR4K3Q96R72 315 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 C20orf85Q9H1P6 137 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR51M1Q9H341 326 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 KIAA1671Q9BY89 1806 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MID1O15344 667 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TXNL1O43396 289 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TGM6O95932 706 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 CLTBP09497 229 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 LIMS3P0CW19 117 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 LIMS4P0CW20 117 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 APEHP13798 732 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 NDUFB7P17568 137 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 S100A11P31949 105 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 KIR3DL1P43629 444 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 NPBWR1P48145 328 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 P2RY4P51582 365 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SNRPGP62308 76 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 ZNF791Q3KP31 576 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 SYTL3Q4VX76 610 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 ACSM5Q6NUN0 579 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 CD200R1LQ6Q8B3 271 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SPRED2Q7Z698 418 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 RBM45Q8IUH3 476 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR5M3Q8NGP4 307 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 CA5BP1Q8WTZ4 195 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TCEAL3Q969E4 200 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TRMT2BQ96GJ1 504 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 HHIPQ96QV1 700 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MARCH5Q9NX47 278 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MARCH2Q9P0N8 246 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 PATJQ8NI35 1801 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 KIF26AQ9ULI4 1882 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 ANHXE9PGG2 379 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 GNB5O14775 395 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 EN2P19622 333 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 TBXA2RP21731 343 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 GABRA5P31644 462 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 XCR1P46094 333 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 PRMT2P55345 433 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 DHODHQ02127 395 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TPBGQ13641 420 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MICBQ29980 383 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SLC25A35Q3KQZ1 300 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MEDAGQ5VYS4 303 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 KIAA1211LQ6NV74 962 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 AFTPHQ6ULP2 937 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SCD5Q86SK9 330 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SYT9Q86SS6 491 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms