RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PLOD3O60568 738 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SOX30O94993 753 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CT62P0C5K7 136 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 TTKP33981 857 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 MAGEA8P43361 318 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 C1DQ13901 141 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 ELOA3BQ3SY89 546 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 IQCCQ4KMZ1 466 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SLC35F1Q5T1Q4 408 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 OGFOD3Q6PK18 319 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 TSPYL5Q86VY4 417 aaPredicted RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 WDR5BQ86VZ2 330 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 LINC00471Q8N535 108 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ELOA3Q8NG57 546 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 MPP4Q96JB8 637 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PRRC1Q96M27 445 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 IFT27Q9BW83 186 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ITPAQ9BY32 194 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SLC38A1Q9H2H9 487 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PRDM9Q9NQV7 894 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 DUSP22Q9NRW4 184 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ACER3Q9NUN7 267 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 DNAJC27Q9NZQ0 273 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 RSL24D1Q9UHA3 163 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 SDK2Q58EX2 2172 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CUL9Q8IWT3 2517 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 LOC100506127A0A0U1RQW1 187 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CYR61O00622 381 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 MYL12BO14950 172 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 FOXS1O43638 330 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ASNA1O43681 348 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ACP2P11117 423 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 GSTM3P21266 225 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CBLP22681 906 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PAX7P23759 505 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 GTF2E2P29084 291 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 CNR2P34972 360 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 GRK6P43250 576 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 DCDP81605 110 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 RELAQ04206 551 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 IL18R1Q13478 541 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 FXNQ16595 210 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PIWIL3Q7Z3Z3 882 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 GHDCQ8N2G8 530 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 IQCF1Q8N6M8 205 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 STT3BQ8TCJ2 826 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SLC7A13Q8TCU3 470 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 UBE2FQ969M7 185 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CCDC74BQ96LY2 380 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 THSD1Q9NS62 852 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PILRBQ9UKJ0 227 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ERGIC3Q9Y282 383 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 BPTFQ12830 3046 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PNMA8CA0A1B0GUJ8 204 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SLITRK5O94991 958 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 OR6A2O95222 327 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 LGI1O95970 557 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ADAP00813 363 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ATP1B1P05026 303 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 HBQ1P09105 142 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 EPHA2P29317 976 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 MAP4K2Q12851 820 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 CDK5R2Q13319 367 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 BIKQ13323 160 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 PTGES3Q15185 160 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 ANGPT1Q15389 498 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SMN1Q16637 294 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 PRTGQ2VWP7 1150 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 KCTD21Q4G0X4 260 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 ALG10BQ5I7T1 473 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 BMP8AQ7Z5Y6 402 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 OR4N2Q8NGD1 307 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 C16orf52Q8NHV5 167 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 FLVCR1-AS1Q8TAF5 88 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 YTHDF1Q9BYJ9 559 aaKnown RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 ULBP3Q9BZM4 244 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 STRADBQ9C0K7 418 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 SERHL2Q9H4I8 314 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 MKKSQ9NPJ1 570 aaPredicted RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 C19orf25Q9UFG5 118 aaPredicted RBP8.67□□□□□ -1.02
SSR3-201ENST00000265044 NTNG1Q9Y2I2 539 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 NEUROG3Q9Y4Z2 214 aa8.67□□□□□ -1.02
SSR3-201ENST00000265044 BLACEA4D250 179 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 SLC1A7O00341 560 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 NDUFB5O43674 189 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 MAGEA2P43356 314 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 SMSP52788 366 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 PUM1Q14671 1186 aaKnown RBP eCLIP8.66□□□□□ -1.028e-9■□□□□ 10.1
SSR3-201ENST00000265044 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 RTL4Q6ZR62 310 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 ZNF550Q7Z398 422 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 OR2L13Q8N349 312 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 WDR36Q8NI36 951 aaKnown RBP8.66□□□□□ -1.02
SSR3-201ENST00000265044 MIPOL1Q8TD10 442 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 C10orf90Q96M02 699 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 SMAD5Q99717 465 aaKnown RBP8.66□□□□□ -1.02
SSR3-201ENST00000265044 DEFB126Q9BYW3 111 aa8.66□□□□□ -1.02
SSR3-201ENST00000265044 OR51V1Q9H2C8 321 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms