RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 LHCGRP22888 699 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 LINC01599Q8WXQ3 324 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 HDAC8Q9BY41 377 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 POT1Q9NUX5 634 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 FBXO9Q9UK97 447 aaPredicted RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 CSNK1G3Q9Y6M4 447 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 FXYD6-FXYD2A0A087WZ82 144 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 C12orf71A8MTZ7 269 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ZNF181Q2M3W8 571 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 LILRA3Q8N6C8 439 aaPredicted RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 PCDHB16Q9NRJ7 776 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 VNN3Q9NY84 501 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ADAM29Q9UKF5 820 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 OR2AT4A6NND4 320 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 GPR75O95800 540 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 YPEL5P62699 121 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 FAM217AQ8IXS0 508 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 OR8S1Q8NH09 359 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ZNF583Q96ND8 569 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 TMEM168Q9H0V1 697 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 INTS6Q9UL03 887 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 ADAMTS7Q9UKP4 1686 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 PRKYO43930 277 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 SLCO2B1O94956 709 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 ARAFP10398 606 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 CPMP14384 443 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 OTX2P32243 289 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 CD97P48960 835 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 LRRN1Q6UXK5 716 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 USP36Q9P275 1121 aaKnown RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 RBBP9O75884 186 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 AIFM1O95831 613 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 PRH1P02810 166 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 FRKP42685 505 aaPredicted RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 EIF5AP63241 154 aaKnown RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 PUDPQ08623 228 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 LPAL2Q16609 132 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 OCLNQ16625 522 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 ZNF615Q8N8J6 731 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 F5P12259 2224 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 H0YGG7 62 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 TEX46H3BTG2 121 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 GFRA2O00451 464 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 GSTT2P0CG29 244 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 MAP2K3P46734 347 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 EMP2P54851 167 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 WNT4P56705 351 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 PRPS1P60891 318 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 ARF3P61204 181 aaPredicted RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 GALK2Q01415 458 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 FCRLBQ6BAA4 426 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 PLAG1Q6DJT9 500 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 LRRC20Q8TCA0 184 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 ACOT11Q8WXI4 607 aaPredicted RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 WBP2Q969T9 261 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 NAA11Q9BSU3 229 aaPredicted RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 SH2B3Q9UQQ2 575 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 KIAA0355O15063 1070 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 TAPBPO15533 448 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 MRPS14O60783 128 aaKnown RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 IGLV3-27P01718 113 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 P04436 131 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 PNMTP11086 282 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 FUT1P19526 365 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 OR9A4Q8NGU2 314 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 CHFRQ96EP1 664 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 MAELQ96JY0 434 aaKnown RBP13.17□□□□□ -0.3
CDH3-201ENST00000264012 GPR78Q96P69 363 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 P2RY12Q9H244 342 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 SRPK3Q9UPE1 567 aa13.17□□□□□ -0.3
CDH3-201ENST00000264012 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 TEX13DA0A0J9YY54 714 aaPredicted RBP13.16□□□□□ -0.3
CDH3-201ENST00000264012 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 PCDH17O14917 1159 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
CDH3-201ENST00000264012 SEC14L5O43304 696 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms