RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PCBD2Q9H0N5 130 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 TMEM38AQ9H6F2 299 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 A0A087WUU8 490 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 FFAR1O14842 300 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 AKR7A2O43488 359 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 COQ9O75208 318 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 KAT7O95251 611 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 PVRP15151 417 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ZNF24P17028 368 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ACADLP28330 430 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 MLLT11Q13015 90 aaPredicted RBP15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 TP53I3Q53FA7 332 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 BICRALQ6AI39 1079 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ZNF438Q7Z4V0 828 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ELMOD2Q8IZ81 293 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ANKRD53Q8N9V6 530 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 TMEM255BQ8WV15 326 aa15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 NARS2Q96I59 477 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-201ENST00000263666 ANKRD34BA5PLL1 514 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 B4GALT2O60909 372 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SHC1P29353 583 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 FLYWCH1Q4VC44 716 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 ENTPD8Q5MY95 495 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 FAM205BPQ63HN1 556 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RPTNQ6XPR3 784 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 TECPR1Q7Z6L1 1165 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SLC16A11Q8NCK7 471 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 OR4D11Q8NGI4 311 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 EFHD2Q96C19 240 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 MS4A8Q9BY19 250 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RASD1Q9Y272 281 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GRIP1Q9Y3R0 1128 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 ANKRD36A6QL64 1941 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 A0A1W2PQU0 124 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 TEX46H3BTG2 121 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 MRPS14O60783 128 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 HOXB2P14652 356 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 TRIM23P36406 574 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PPP3R1P63098 170 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PSPHP78330 225 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RHAGQ02094 409 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RPA4Q13156 261 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 FGFBP1Q14512 234 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 NDUFA9Q16795 377 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 XKRXQ6PP77 449 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 VASH1Q7L8A9 365 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 MEIOBQ8N635 442 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 OR2L2Q8NH16 312 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SETD7Q8WTS6 366 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 OSTF1Q92882 214 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 NEURL3Q96EH8 262 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PDXPQ96GD0 296 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SLC41A3Q96GZ6 507 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 DPCDQ9BVM2 203 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PPIEQ9UNP9 301 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 EXOSC1Q9Y3B2 195 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 NDUFV2P19404 249 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GABRA3P34903 492 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 CRYBA2P53672 197 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RUNX3Q13761 415 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 NTRK2Q16620 822 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PRSS53Q2L4Q9 553 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 C9orf50Q5SZB4 431 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SLX4IPQ5VYV7 408 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PRR23CQ6ZRP0 262 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 CHMP1BQ7LBR1 199 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SRFBP1Q8NEF9 429 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 OR56A1Q8NGH5 318 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 OR7D2Q96RA2 312 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GSDMCQ9BYG8 508 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 TRIM36Q9NQ86 728 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PLCXD1Q9NUJ7 323 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 EXO1Q9UQ84 846 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 AK6Q9Y3D8 172 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 FOXE1O00358 373 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GABRPO00591 440 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 AIFM1O95831 613 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 HMGN1P05114 100 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 PSMB10P40306 273 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GNG2P59768 71 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 CDK3Q00526 305 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 EXOSC7Q15024 291 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 ZNF362Q5T0B9 420 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 ESPNLQ6ZVH7 1005 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 IL17RDQ8NFM7 739 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GRPEL2Q8TAA5 225 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 RFT1Q96AA3 541 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 GPR174Q9BXC1 333 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 CDCP1Q9H5V8 836 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 SATB2Q9UPW6 733 aa15.19■□□□□ 0.02
PDZRN3-201ENST00000263666 BLOC1S5-TXNDC5H3BN57 136 aa15.18■□□□□ 0.02
PDZRN3-201ENST00000263666 ITPKBP27987 946 aa15.18■□□□□ 0.02
PDZRN3-201ENST00000263666 RAB28P51157 221 aa15.18■□□□□ 0.02
PDZRN3-201ENST00000263666 FABP5Q01469 135 aa15.18■□□□□ 0.02
PDZRN3-201ENST00000263666 ZNF267Q14586 743 aaPredicted RBP15.18■□□□□ 0.02
PDZRN3-201ENST00000263666 HNRNPA1L2Q32P51 320 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms