RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IGHV3-20A0A0C4DH32 117 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 TEX51A0A1B0GUA7 166 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 A0A1W2PNU3 283 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PEX12O00623 359 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DENRO43583 198 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 UGT2B17O75795 530 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DKK1O94907 266 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 JMJD7P0C870 316 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 IL7RP16871 459 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 EIF3IQ13347 325 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 EBPQ15125 230 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NNATQ16517 81 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 C6orf52Q5T4I8 152 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 C9orf40Q8IXQ3 194 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 CLIP4Q8N3C7 705 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 BCORP1Q8N888 145 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DEFB124Q8NES8 71 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NFAM1Q8NET5 270 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 OR6T1Q8NGN1 323 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 MESP1Q9BRJ9 268 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 SMURF2Q9HAU4 748 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 ACER3Q9NUN7 267 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PPIEQ9UNP9 301 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 OR10H1Q9Y4A9 318 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NPIPA5A0A0B4J1W7 369 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 FRG2CA6NGY1 282 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 SAGE2PA6NJ88 616 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 OR6C76A6NM76 312 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 C9J4A7 227 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NPIPA7E9PJI5 369 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 TNFRSF11BO00300 401 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PLD2O14939 933 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 STK17BO94768 372 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NPIPA8P0DM63 369 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NID1P14543 1247 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DRD5P21918 477 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PRKACGP22612 351 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 LIMS1P48059 325 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 HMGA2P52926 109 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 CDH12P55289 794 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 GK3PQ14409 553 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 LAPTM4AQ15012 233 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 NPTX1Q15818 432 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 FLYWCH1Q4VC44 716 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 LIN52Q52LA3 116 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DEF8Q6ZN54 512 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DHRS1Q96LJ7 313 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 WDR77Q9BQA1 342 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 G6PC3Q9BUM1 346 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 Q9H521 79 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 SLC13A4Q9UKG4 626 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PCDHGA3Q9Y5H0 932 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 PCDHGA10Q9Y5H3 936 aa21.18■□□□□ 0.98
SMARCB1-201ENST00000263121 DCAF7P61962 342 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 GANABQ14697 944 aaKnown RBP21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 NCF4Q15080 339 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 EIPR1Q53HC9 387 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 RNF220Q5VTB9 566 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 ANKRD34AQ69YU3 496 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 CYP4Z1Q86W10 505 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 LCORQ96JN0 433 aaPredicted RBP21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 SEMA4CQ9C0C4 833 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 NXF5Q9H1B4 397 aaKnown RBP21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 RLIMQ9NVW2 624 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 KLHL28Q9NXS3 571 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 PDP1Q9P0J1 537 aaPredicted RBP21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 A4GNTQ9UNA3 340 aa21.17■□□□□ 0.98
SMARCB1-201ENST00000263121 C2orf92A0A1B0GVN3 265 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 CLDN24A6NM45 220 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 NPIPB9F8W1W9 429 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 DLGAP3O95886 979 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 FUT4P22083 530 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 RFX3P48380 749 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 CPEB2Q7Z5Q1 589 aaKnown RBP21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 B3GNT7Q8NFL0 401 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 PHF10Q8WUB8 498 aaKnown RBP21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 TFAP2CQ92754 450 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 RDH12Q96NR8 316 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 SPRY4Q9C004 299 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 WWTR1Q9GZV5 400 aa21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 C19orf25Q9UFG5 118 aaPredicted RBP21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 TMEFF2Q9UIK5 374 aaPredicted RBP21.16■□□□□ 0.98
SMARCB1-201ENST00000263121 KLF7O75840 302 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 GADD45GO95257 159 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 MED21Q13503 144 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 PAPD4Q6PIY7 484 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 SLC29A4Q7RTT9 530 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 ADI1Q9BV57 179 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 NMNAT1Q9HAN9 279 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 RHCGQ9UBD6 479 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 C9orf172C9J069 976 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 FRS3O43559 492 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 PRKNO60260 465 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 SNAP29O95721 258 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 THRBP10828 461 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 LIMK1P53667 647 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 MERTKQ12866 999 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 ZNF141Q15928 474 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms