RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 OVCH2Q7RTZ1 564 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SZRD1Q7Z422 152 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 MRGPREQ86SM8 312 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 TBC1D19Q8N5T2 526 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 RPLP0P6Q8NHW5 317 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 OR5P2Q8WZ92 322 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 MS4A7Q9GZW8 240 aaPredicted RBP14.05□□□□□ -0.16
XRCC1-201ENST00000262887 ACSL5Q9ULC5 683 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 WDPCPO95876 746 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 HMGN1P05114 100 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 DRD2P14416 443 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 NPPBP16860 134 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SDHBP21912 280 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SCRN3Q0VDG4 424 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 C3P1Q6ZMU1 363 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 HMGN2P46Q86SG4 172 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 OR6T1Q8NGN1 323 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SFXN2Q96NB2 322 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF649Q9BS31 505 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SLC6A15Q9H2J7 730 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 BAIAP2Q9UQB8 552 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 H0YC42 278 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 NUPL2O15504 423 aaKnown RBP14.05□□□□□ -0.16
XRCC1-201ENST00000262887 FZD7O75084 574 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 BLVRAP53004 296 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 EPHA4P54764 986 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 GRM7Q14831 915 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 SMARCD3Q6STE5 483 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF322Q6U7Q0 402 aaPredicted RBP14.05□□□□□ -0.16
XRCC1-201ENST00000262887 YIPF5Q969M3 257 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 VOPP1Q96AW1 172 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 BEX1Q9HBH7 125 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 NEUROD4Q9HD90 331 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 PRELID3BQ9Y3B1 194 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 PPIL1Q9Y3C6 166 aa14.05□□□□□ -0.16
XRCC1-201ENST00000262887 DOCK6Q96HP0 2047 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SLC22A23A1A5C7 686 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM88BA6NKF7 163 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF593O00488 134 aaPredicted RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 B4GALT2O60909 372 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ACP5P13686 325 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SHC1P29353 583 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 PBLDP30039 288 aaPredicted RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SLC11A1P49279 550 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 MLLT1Q03111 559 aaPredicted RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 LMAN2Q12907 356 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 RASSF6Q6ZTQ3 369 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 USP50Q70EL3 339 aaPredicted RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF527Q8NB42 609 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF740Q8NDX6 193 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 OR56B4Q8NH76 319 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 TRMT10AQ8TBZ6 339 aaKnown RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 XAGE5Q8WWM1 108 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SIPA1Q96FS4 1042 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ART5Q96L15 291 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 PRRC1Q96M27 445 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ZNF416Q9BWM5 594 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ABCG4Q9H172 646 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 LDAHQ9H6V9 325 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 CNIH4Q9P003 139 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 C5AR2Q9P296 337 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 P2RX2Q9UBL9 471 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 CLEC4EQ9ULY5 219 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 LIPT1Q9Y234 373 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 IGHA1P01876 353 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 HPXP02790 462 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ASGR1P07306 291 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 NR2F1P10589 423 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 RAB3AP20336 220 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 PDHA2P29803 388 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 CTSCP53634 463 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 RGS7BPQ6MZT1 257 aaPredicted RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SFXN4Q6P4A7 337 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 MAMSTRQ6ZN01 415 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 OLIG3Q7RTU3 272 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 PM20D2Q8IYS1 436 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 SMPDL3AQ92484 453 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 DDOQ99489 341 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 DPYSL5Q9BPU6 564 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 BRD7Q9NPI1 651 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 MED9Q9NWA0 146 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 OR6C2Q9NZP2 312 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 COPS3Q9UNS2 423 aa14.04□□□□□ -0.16
XRCC1-201ENST00000262887 EXOGQ9Y2C4 368 aaKnown RBP14.04□□□□□ -0.16
XRCC1-201ENST00000262887 ADAM11O75078 769 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 OR5F1O95221 314 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 MT-ND4P03905 459 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 CD70P32970 193 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 OR1D2P34982 312 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 CTSOP43234 321 aaPredicted RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 RNF144AP50876 292 aaPredicted RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 OR10A3P58181 314 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 SHC2P98077 582 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 TLE2Q04725 743 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 TCTE1Q5JU00 501 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 SLC30A6Q6NXT4 461 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 FAM198BQ6UWH4 519 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms