RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
CCDC54-201ENST00000261058 COMMD3-BMI1R4GMX3 469 aa3.55□□□□□ -1.84
CCDC54-201ENST00000261058 ROCK1Q13464 1354 aa3.55□□□□□ -1.84
CCDC54-201ENST00000261058 PTCH1Q13635 1447 aa3.55□□□□□ -1.84
CCDC54-201ENST00000261058 SERTM2A0A1B0GWG4 89 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 MACROD2A1Z1Q3 448 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 YJEFN3A6XGL0 299 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 MEI4A8MW99 385 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF879B4DU55 563 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 E9PMD0 336 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 GOLGA8SH3BPF8 625 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 TRDMT1O14717 391 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 CRLF1O75462 422 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ANXA9O76027 345 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 MFN2O95140 757 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ECDO95905 644 aaPredicted RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HPRP00739 348 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 FCER2P06734 321 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HOXD4P09016 255 aaPredicted RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 STAG3L3P0CL85 134 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 EZRP15311 586 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HPGDP15428 266 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF18P17022 549 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 PTBP1P26599 531 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 SHC1P29353 583 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 LONP1P36776 959 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 OR1G1P47890 313 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HNRNPFP52597 415 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 RIDAP52758 137 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 CARD18P57730 90 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 CBX1P83916 185 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 SNCBQ16143 134 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 CDC42EP5Q6NZY7 148 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 SASS6Q6UVJ0 657 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 C6orf89Q6UWU4 347 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 NLRP9Q7RTR0 991 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 NANOGNBQ7Z5D8 188 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 TMCO2Q7Z6W1 182 aaPredicted RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 KIAA1328Q86T90 577 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ADAMTSL2Q86TH1 951 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 BIVMQ86UB2 503 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ARFGAP2Q8N6H7 521 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 C4orf32Q8N8J7 132 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 FADS6Q8N9I5 356 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 FAM71CQ8NEG0 241 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 TMEM185AQ8NFB2 350 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 OR1K1Q8NGR3 316 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 AKR7LQ8NHP1 331 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 FLVCR1-AS1Q8TAF5 88 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ESAMQ96AP7 390 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 RASD2Q96D21 266 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 LRRC39Q96DD0 335 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 SNF8Q96H20 258 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 TTC25Q96NG3 672 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 COQ7Q99807 217 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF416Q9BWM5 594 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 TBC1D10AQ9BXI6 508 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 DDX47Q9H0S4 455 aaKnown RBP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 NT5DC2Q9H857 520 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HEXA-AS1Q9H8Q6 139 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC54-201ENST00000261058 C15orf41Q9Y2V0 281 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 MFHAS1Q9Y4C4 1052 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 ATG4BQ9Y4P1 393 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 HCFC1P51610 2035 aa3.54□□□□□ -1.84
CCDC54-201ENST00000261058 A0A075B6Q4 140 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 GOLGA8OA6NCC3 632 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 GOLGA8NF8WBI6 632 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 LGALS8O00214 317 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 PDHXO00330 501 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 EEF2KO00418 725 aaKnown RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 DNALI1O14645 258 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 PRRG1O14668 218 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CHADO15335 359 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 MED7O43513 233 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 GMNNO75496 209 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 FLOT1O75955 427 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 APRTP07741 180 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CALCBP10092 127 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 PPP2R1AP30153 589 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 OXTRP30559 389 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 MAT2AP31153 395 aaKnown RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 PRKAR2BP31323 418 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CCL11P51671 97 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 NDST1P52848 882 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 PEX3P56589 373 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 MAP3K7CLP57077 242 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 EIF3EP60228 445 aaKnown RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 SSTP61278 116 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CDKL1Q00532 357 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 MAB21L1Q13394 359 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 KLF5Q13887 457 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 BTG3Q14201 252 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 HAGHQ16775 308 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 TMEM41BQ5BJD5 291 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 RTL6Q6ICC9 239 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 WDR88Q6ZMY6 472 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms