RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 UNC50Q53HI1 259 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 METTL2BQ6P1Q9 378 aaKnown RBP11.33□□□□□ -0.6
CSHL1-201ENST00000259003 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM171Q8WVE6 324 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSHL1-201ENST00000259003 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 FAIM2Q9BWQ8 316 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 ACPTQ9BZG2 426 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 SLC35C2Q9NQQ7 365 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 NINJ2Q9NZG7 142 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 VPS29Q9UBQ0 182 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 PSME2Q9UL46 239 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 LAMP3Q9UQV4 416 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 OR10H1Q9Y4A9 318 aa11.33□□□□□ -0.6
CSHL1-201ENST00000259003 A8MT66 165 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 PCDH7O60245 1069 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
CSHL1-201ENST00000259003 SOD3P08294 240 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 HSD17B3P37058 310 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 CDKN1AP38936 164 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 EIF1AXP47813 144 aaKnown RBP11.32□□□□□ -0.6
CSHL1-201ENST00000259003 TRA2BP62995 288 aaKnown RBP11.32□□□□□ -0.6
CSHL1-201ENST00000259003 CLEC12BQ2HXU8 276 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM44Q2T9K0 475 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 BEX5Q5H9J7 111 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 HMBOX1Q6NT76 420 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 MFSD12Q6NUT3 480 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM107Q6UX40 140 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 SLC9A6Q92581 669 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 KCNA7Q96RP8 456 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 C12orf49Q9H741 205 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 BRF2Q9HAW0 419 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 VDAC3Q9Y277 283 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 ZNF175Q9Y473 711 aa11.32□□□□□ -0.6
CSHL1-201ENST00000259003 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 EIF1AYO14602 144 aaKnown RBP11.31□□□□□ -0.6
CSHL1-201ENST00000259003 CXCL13O43927 109 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 PLOD3O60568 738 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 SMIM24O75264 130 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 RBP1P09455 135 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 IL11P20809 199 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 SHC1P29353 583 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ACVR1BP36896 505 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 VEZF1Q14119 521 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 SGCBQ16585 318 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ERCC6LQ2NKX8 1250 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 GRAMD1BQ3KR37 738 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 CCDC91Q7Z6B0 441 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ZAR1Q86SH2 424 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 LSRQ86X29 649 aaPredicted RBP11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ZNF619Q8N2I2 560 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ZNF611Q8N823 705 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 GATSQ8NAP1 163 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 PIK3R3Q92569 461 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ADGRG7Q96K78 797 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM185BQ9H7F4 350 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 ZDHHC18Q9NUE0 388 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 SNX6Q9UNH7 406 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 TIMM22Q9Y584 194 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
CSHL1-201ENST00000259003 GNG14A0A1W2PPG7 69 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 MYO1GB0I1T2 1018 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 OVOL3O00110 214 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 UPK1AO00322 258 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 BCAS2O75934 225 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 UTS2O95399 124 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 OTCP00480 354 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 PTNP21246 168 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 FOXA1P55317 472 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 CLCQ05315 142 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 DMTNQ08495 405 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 C17orf53Q8N3J3 647 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 GBP7Q8N8V2 638 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 OR10D3Q8NH80 312 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 CDC26Q8NHZ8 85 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 ROBO4Q8WZ75 1007 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 C11orf24Q96F05 449 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 TMEM237Q96Q45 408 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 GLIPR2Q9H4G4 154 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 FBXO34Q9NWN3 711 aa11.3□□□□□ -0.6
CSHL1-201ENST00000259003 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 MAGED1Q9Y5V3 778 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-201ENST00000259003 A0A0J9YW62 118 aa11.29□□□□□ -0.6
CSHL1-201ENST00000259003 TRIM49D1C9J1S8 452 aa11.29□□□□□ -0.6
CSHL1-201ENST00000259003 TNFSF11O14788 317 aa11.29□□□□□ -0.6
CSHL1-201ENST00000259003 GPRIN2O60269 458 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms