RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 CLUP10909 449 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 ACP2P11117 423 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 IFNGR2P38484 337 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 SRP9P49458 86 aaKnown RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 OR10A3P58181 314 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 AGERQ15109 404 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 SLC37A3Q8NCC5 494 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 OR4M2Q8NGB6 313 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 OR4Q3Q8NH05 313 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 A0A1W2PRQ8 180 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 DAPL1A0PJW8 107 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 YES1P07947 543 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 CHRNB1P11230 501 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 SHC1P29353 583 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 PCDH1Q08174 1060 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 FUT5Q11128 374 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 ST3GAL3Q11203 375 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 MLF2Q15773 248 aaPredicted RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 PLK5Q496M5 336 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 XKRXQ6PP77 449 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 ESPNLQ6ZVH7 1005 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 COQ3Q9NZJ6 369 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.39
VHL-201ENST00000256474 DNAJB6O75190 326 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 LGI1O95970 557 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 SYPP08247 313 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 BMP7P18075 431 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ALAS2P22557 587 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 NDUFA5Q16718 116 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 Q5BKY6 102 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 BCL2L15Q5TBC7 163 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 MZT2BQ6NZ67 158 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 BHLHB9Q6PI77 547 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 RASGRP3Q8IV61 690 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 FAM26EQ8N5C1 309 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ORAI1Q96D31 301 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 HINT3Q9NQE9 182 aaKnown RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 GRIP1Q9Y3R0 1128 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 FRYLO94915 3013 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 A0A0B4J293 547 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 GRXCR1A8MXD5 290 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 LYRM1O43325 122 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 IL1AP01583 271 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 PIPP12273 146 aaPredicted RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 NT5EP21589 574 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 TALDO1P37837 337 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ETV6P41212 452 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 PXNP49023 591 aaPredicted RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 VEGFBP49765 207 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 CDK10Q15131 360 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 BCL2A1Q16548 175 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 FRMD1Q8N878 549 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 OR2A1Q8NGT9 310 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 APOBEC4Q8WW27 367 aaKnown RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 RIPOR3Q96MK2 946 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 B3GAT2Q9NPZ5 323 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 STARD5Q9NSY2 213 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ICKQ9UPZ9 632 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 PRKNO60260 465 aaPredicted RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 ANXA11P50995 505 aaKnown RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 RAB28P51157 221 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
VHL-201ENST00000256474 FAM111BQ6SJ93 734 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 WDR34Q96EX3 536 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 SLC41A3Q96GZ6 507 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 AICDAQ9GZX7 198 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 ENKD1Q9H0I2 346 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 FBXL4Q9UKA2 621 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 GPR34Q9UPC5 381 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 CELSR3Q9NYQ7 3312 aa12.64□□□□□ -0.39
VHL-201ENST00000256474 A0A1W2PPV9 198 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 CDC123O75794 336 aaPredicted RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 TOXO94900 526 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 ATP5A1P25705 553 aaKnown RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 REEP5Q00765 189 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 IRF4Q15306 451 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 METRNLQ641Q3 311 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 CXXC5Q7LFL8 322 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms