RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 UBCP0CG48 685 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 RPL34P49207 117 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 CTSCP53634 463 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 RPS27AP62979 156 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 UBA52P62987 128 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SLC7A9P82251 487 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 PDZK1IP1Q13113 114 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 CAMK2GQ13555 558 aaPredicted RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 PTRHD1Q6GMV3 140 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 TPGS1Q6ZTW0 290 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SLC35F3Q8IY50 421 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 WDTC1Q8N5D0 677 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 TRAM1L1Q8N609 369 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 OR56A4Q8NGH8 313 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 C2CD4CQ8TF44 421 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 TM9SF4Q92544 642 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 NDRG1Q92597 394 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 RFKQ969G6 155 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 MOCOSQ96EN8 888 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 ELF4Q99607 663 aaPredicted RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 RHBGQ9H310 441 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 CACYBPQ9HB71 228 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SLC6A20Q9NP91 592 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF69Q9UC07 566 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 PISDQ9UG56 409 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 MRTO4Q9UKD2 239 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 SAMD4AQ9UPU9 718 aaKnown RBP11.13□□□□□ -0.63
CCNA1-201ENST00000255465 MKRN2OSH3BPM6 223 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 AZIN1O14977 448 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 MDM4O15151 490 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 BCAT2O15382 392 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GUCA1CO95843 209 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 HGFP14210 728 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 CXCL2P19875 107 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 DDTP30046 118 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GDI1P31150 447 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 SLC6A4P31645 630 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GNALP38405 381 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GLRBP48167 497 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 RGS4P49798 205 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 SKP1P63208 163 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 ZXDBP98169 803 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 SIGLEC14Q08ET2 396 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GANABQ14697 944 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 DHCR24Q15392 516 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 MED22Q15528 200 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GSG1Q2KHT4 349 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 RNASE10Q5GAN6 216 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 PCID2Q5JVF3 399 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 ATG9BQ674R7 924 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 BAIAP2L2Q6UXY1 529 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 BHLHA9Q7RTU4 235 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 ZDHHC21Q8IVQ6 265 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 YAF2Q8IY57 180 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 BEND2Q8NDZ0 799 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 OR56B4Q8NH76 319 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TWIST2Q8WVJ9 160 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 XAGE5Q8WWM1 108 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 PEX11GQ96HA9 241 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 NLNQ9BYT8 704 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 B3GAT2Q9NPZ5 323 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 MIA3Q5JRA6 1907 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 YJEFN3A6XGL0 299 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TXNL1O43396 289 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 NSA2O95478 260 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TBX18O95935 607 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 PLGP00747 810 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TCRBP04435 133 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 CBSLP0DN79 551 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 DRD2P14416 443 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 CBSP35520 551 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 DAOAP59103 153 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 IL18Q14116 193 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TOMM34Q15785 309 aaPredicted RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF77Q15935 545 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 MOB3CQ70IA8 216 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 FAM86B1Q8N7N1 296 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 RTL3Q8N8U3 475 aaKnown RBP11.12□□□□□ -0.63
CCNA1-201ENST00000255465 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
CCNA1-201ENST00000255465 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms