RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 GPN3Q9UHW5 284 aaPredicted RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 PPIEQ9UNP9 301 aaKnown RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 ZNF443Q9Y2A4 671 aaPredicted RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 SLC9A8Q9Y2E8 581 aa8.76□□□□□ -1.01
NIP7-202ENST00000254941 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
NIP7-202ENST00000254941 SAMHD1Q9Y3Z3 626 aaKnown RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 FAM32AQ9Y421 112 aaKnown RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 CHST2Q9Y4C5 530 aa8.76□□□□□ -1.01
NIP7-202ENST00000254941 PCDHGA3Q9Y5H0 932 aa8.76□□□□□ -1.01
NIP7-202ENST00000254941 MAGED1Q9Y5V3 778 aaPredicted RBP8.76□□□□□ -1.01
NIP7-202ENST00000254941 TEX51A0A1B0GUA7 166 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 PMS2P1A4D2B8 440 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 SAGE2PA6NJ88 616 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 J3KTA2 159 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 DLGAP1O14490 977 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 UGT2B17O75795 530 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 KLF7O75840 302 aaPredicted RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 IGKV1D-16P01601 117 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 DBIP07108 87 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 NID1P14543 1247 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 UQCRBP14927 111 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 FPR1P21462 350 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 DRD5P21918 477 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 RRM2P31350 389 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 ARHGDIAP52565 204 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 HMGA2P52926 109 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 DCAF7P61962 342 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 EEF1A1P68104 462 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 PPP2R2BQ00005 443 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 EBPQ15125 230 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 MAPK14Q16539 360 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 ZAR1Q86SH2 424 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 LACC1Q8IV20 430 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 C9orf40Q8IXQ3 194 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 HS3ST5Q8IZT8 346 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 NFAM1Q8NET5 270 aaPredicted RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 B3GNT7Q8NFL0 401 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 WDR36Q8NI36 951 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 NAF1Q96HR8 494 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 LCORQ96JN0 433 aaPredicted RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 G6PC3Q9BUM1 346 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 OSBPL10Q9BXB5 764 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 SPRY4Q9C004 299 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 SEMA4CQ9C0C4 833 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 CACYBPQ9HB71 228 aaKnown RBP8.75□□□□□ -1.01
NIP7-202ENST00000254941 KCNE5Q9UJ90 142 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 KCND3Q9UK17 655 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 ACAD8Q9UKU7 415 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 CBLCQ9ULV8 474 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 RAB26Q9ULW5 256 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 LRCH1Q9Y2L9 728 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 OR10H1Q9Y4A9 318 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 LYVE1Q9Y5Y7 322 aa8.75□□□□□ -1.01
NIP7-202ENST00000254941 IGHV3-20A0A0C4DH32 117 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CENPVL1A0A0U1RR11 272 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 C2orf92A0A1B0GVN3 265 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 FRG2CA6NGY1 282 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 C9orf172C9J069 976 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NPIPB9F8W1W9 429 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 M0R3H8 397 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PEX12O00623 359 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 FFAR1O14842 300 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 DLGAP3O95886 979 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 HPRP00739 348 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CD63P08962 238 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 YAP1P46937 504 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 DAG1Q14118 895 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 GK3PQ14409 553 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NNATQ16517 81 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.74□□□□□ -1.01
NIP7-202ENST00000254941 FLYWCH1Q4VC44 716 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NHSL2Q5HYW2 709 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RNF220Q5VTB9 566 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CPEB2Q7Z5Q1 589 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 RBM45Q8IUH3 476 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 CACTIN-AS1Q8N1I8 211 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CLIP4Q8N3C7 705 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 BCORP1Q8N888 145 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 C17orf47Q8NEP4 570 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 OR6T1Q8NGN1 323 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 VANGL1Q8TAA9 524 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 MAGEE2Q8TD90 523 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 LPAR4Q99677 370 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 ARHGDIGQ99819 225 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RBM4BQ9BQ04 359 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 WDR77Q9BQA1 342 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 MESP1Q9BRJ9 268 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RBM4Q9BWF3 364 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 OSBPL11Q9BXB4 747 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 GABARAPL1Q9H0R8 117 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NXF5Q9H1B4 397 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 ACER3Q9NUN7 267 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RLIMQ9NVW2 624 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 KLHL28Q9NXS3 571 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 USE1Q9NZ43 259 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 C19orf25Q9UFG5 118 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 SLC13A4Q9UKG4 626 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms