RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KNG1P01042 644 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 CXADRP78310 365 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 OLIG2Q13516 323 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 FIP1L1Q6UN15 594 aaKnown RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 P4HA3Q7Z4N8 544 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 STEAP2Q8NFT2 490 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR4C15Q8NGM1 316 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 SUN3Q8TAQ9 357 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 PURGQ9UJV8 347 aaKnown RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 PHYHO14832 338 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 ERVK-21P61565 698 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 HTR4Q13639 388 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 INAVAQ3KP66 663 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 SDHAF3Q9NRP4 125 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 TMPRSS11EQ9UL52 423 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 TNFRSF10BO14763 440 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 GBAP04062 536 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 JUNBP17275 347 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 INHBCP55103 352 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 ITPRIPL2Q3MIP1 535 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 SYPL2Q5VXT5 272 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 PLBD1Q6P4A8 553 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 SHFQ7M4L6 423 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZDHHC14Q8IZN3 488 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF417Q8TAU3 575 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 NIPSNAP3BQ9BS92 247 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 NMNAT1Q9HAN9 279 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 TGOLN2O43493 480 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 CFHP08603 1231 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 CNR1P21554 472 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 NKX3-2P78367 333 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 VEZF1Q14119 521 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 RBMS2Q15434 407 aaKnown RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 UPP1Q16831 310 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLDN19Q8N6F1 224 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF230Q9UIE0 474 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
PCDHGA3-201ENST00000253812 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TMEM150CB9EJG8 249 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TRIM77I1YAP6 450 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ATG12O94817 140 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 SIX6O95475 246 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 HEXBP07686 556 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 RAB40ALP0C0E4 278 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TIA1P31483 386 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 APOOLQ6UXV4 268 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR5W2Q8NH69 310 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 RAB40AQ8WXH6 277 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 MOCOSQ96EN8 888 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF768Q9H5H4 540 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 GORASP2Q9H8Y8 452 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 OSGIN1Q9UJX0 560 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 C5P01031 1676 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 IMPA2O14732 288 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 HLA-AP01891 365 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 HBE1P02100 147 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 IFNGR1P15260 489 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 CDKN1CP49918 316 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TAS2R30P59541 319 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 BTG1P62324 171 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 APOFQ13790 326 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 C18orf63Q68DL7 685 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 VASH1Q7L8A9 365 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 LMF1Q96S06 567 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 STRA6Q9BX79 667 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 NDRG3Q9UGV2 375 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 CPED1A4D0V7 1026 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ANKRD66B4E2M5 251 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 KCNK2O95069 426 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ALPLP05186 524 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR12D1P0DN82 309 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 TAS2R19P59542 299 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms