RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 A0A1W2PQU0 124 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TFECO14948 347 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 LRRTM2O43300 516 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 OR5F1O95221 314 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 HLA-DPB1P04440 258 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TRAPPC2P0DI81 140 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TRAPPC2BP0DI82 140 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 DDOSTP39656 456 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SLC35F1Q5T1Q4 408 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 PPP2R2DQ66LE6 453 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 GDF7Q7Z4P5 450 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 KLHL36Q8N4N3 616 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ZFP41Q8N8Y5 198 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 KCT2Q8NC54 265 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SLC16A11Q8NCK7 471 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 OR4F15Q8NGB8 312 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 MS4A4EQ96PG1 132 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 APOOQ9BUR5 198 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 C1QTNF7Q9BXJ2 289 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 KRCC1Q9NPI7 259 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 DDX28Q9NUL7 540 aaKnown RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 OR6C2Q9NZP2 312 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 H2AFY2Q9P0M6 372 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ATG2BQ96BY7 2078 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TBC1D3KA0A087X1G2 549 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SMIM30A4D0T7 59 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TBC1D3FA6NER0 549 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 RFXAPO00287 272 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 RGS13O14921 159 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ZIC2O95409 532 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 NTN1O95631 604 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 S100A1P23297 94 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ATP6V1E1P36543 226 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 CD79BP40259 229 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 GPR4P46093 362 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 RPS15AP62244 130 aaKnown RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ACSM1Q08AH1 577 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 PGGHGQ32M88 737 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 C6orf132Q5T0Z8 1188 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 TBC1D3GQ6DHY5 549 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 MFSD12Q6NUT3 480 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 CDC73Q6P1J9 531 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 AMIGO1Q86WK6 493 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 YAF2Q8IY57 180 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 PEX5LQ8IYB4 626 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SAMD14Q8IZD0 417 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SLC7A5P1Q8MH63 180 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 LRRC25Q8N386 305 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 Q8N9G6 341 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 OR2T33Q8NG76 320 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 OR14C36Q8NHC7 312 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 COL26A1Q96A83 441 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 SNX18Q96RF0 628 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 COMMD3Q9UBI1 195 aa15.34■□□□□ 0.05
HOXD3-201ENST00000249440 ZNF443Q9Y2A4 671 aaPredicted RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 EXOGQ9Y2C4 368 aaKnown RBP15.34■□□□□ 0.05
HOXD3-201ENST00000249440 EPOPA6NHQ4 379 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 HMX3A6NHT5 357 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 KLF4O43474 513 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 HMGN1P05114 100 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 GAAP10253 952 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 HTR1FP30939 366 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 RCVRNP35243 200 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 IGFALSP35858 605 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 RGS1Q08116 209 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 PUS10Q3MIT2 529 aaKnown RBP15.33■□□□□ 0.05
HOXD3-201ENST00000249440 ZFP69Q49AA0 526 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.05
HOXD3-201ENST00000249440 FAM111BQ6SJ93 734 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 FRRS1Q6ZNA5 592 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 ZNF620Q6ZNG0 422 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 GATAD2AQ86YP4 633 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 VWA5B2Q8N398 1253 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 OR7G2Q8NG99 324 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 OR4E2Q8NGC2 313 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 LCN9Q8WX39 176 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 C11orf54Q9H0W9 315 aaPredicted RBP15.33■□□□□ 0.05
HOXD3-201ENST00000249440 MMP28Q9H239 520 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 C6orf106Q9H6K1 298 aaPredicted RBP15.33■□□□□ 0.05
HOXD3-201ENST00000249440 NTMQ9P121 344 aa15.33■□□□□ 0.05
HOXD3-201ENST00000249440 CENPXA8MT69 81 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 SCAMP1O15126 338 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 RNGTTO60942 597 aaKnown RBP15.33■□□□□ 0.04
HOXD3-201ENST00000249440 LALBAP00709 142 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 IGHA1P01876 353 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 THY1P04216 161 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 NDUFV2P19404 249 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 CELP19835 753 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 SOX18P35713 384 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 PAQR7Q86WK9 346 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 RDH10Q8IZV5 341 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 ATP6V1C2Q8NEY4 427 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 OR52N1Q8NH53 320 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 TMEM255BQ8WV15 326 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 JPH3Q8WXH2 748 aaPredicted RBP15.33■□□□□ 0.04
HOXD3-201ENST00000249440 CDS1Q92903 461 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 ST6GAL2Q96JF0 529 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 C10orf90Q96M02 699 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 TMED9Q9BVK6 235 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D17Q9HA65 648 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms