RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 RDH16O75452 317 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 RCBTB2O95199 551 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 GBX2P52951 348 aaPredicted RBP12.88□□□□□ -0.35
NCLN-201ENST00000246117 CLDN12P56749 244 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 OXA1LQ15070 435 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 HES5Q5TA89 166 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 TMED4Q7Z7H5 227 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 GPR135Q8IZ08 494 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 YIPF7Q8N8F6 280 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 ATP13A2Q9NQ11 1180 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 NUDT15Q9NV35 164 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 PIP5K1CO60331 668 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 DOK2O60496 412 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 APEHP13798 732 aaKnown RBP12.88□□□□□ -0.35
NCLN-201ENST00000246117 PCSK2P16519 638 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 HOXA9P31269 272 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 EIF2DP41214 584 aaKnown RBP12.88□□□□□ -0.35
NCLN-201ENST00000246117 LIM2P55344 173 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
NCLN-201ENST00000246117 Q6ZNB5 142 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 GJD3Q8N144 294 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
NCLN-201ENST00000246117 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 TMEM168Q9H0V1 697 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 CCL27Q9Y4X3 112 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
NCLN-201ENST00000246117 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 GJA4P35212 333 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 SOX18P35713 384 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 BNC1Q01954 994 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 TAF13Q15543 124 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MOV10Q9HCE1 1003 aaKnown RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 IL23AQ9NPF7 189 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 A0A0A6YYC8 382 aaPredicted RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 A0A1W2PS29 197 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 I3L1I5 382 aaPredicted RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 OR2B3O76000 313 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 WISP3O95389 354 aaPredicted RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 PTTG1O95997 202 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 CSTAP01040 98 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MT-ND5P03915 603 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 HTR2BP41595 481 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ALG10BQ5I7T1 473 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MEDAGQ5VYS4 303 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 FIGLAQ6QHK4 219 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 NRSN1Q8IZ57 195 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 PJA1Q8NG27 643 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 CREB3L4Q8TEY5 395 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 TANKQ92844 425 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ALG8Q9BVK2 526 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MS4A8Q9BY19 250 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 MED12Q93074 2177 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 SH3D21A4FU49 640 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ZFP36L2P47974 494 aaKnown RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
NCLN-201ENST00000246117 EIPR1Q53HC9 387 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 TMEM64Q6YI46 380 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 GALNTL5Q7Z4T8 443 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ZER1Q7Z7L7 766 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 OR5T3Q8NGG3 340 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 CDADC1Q9BWV3 514 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 RAB11FIP5Q9BXF6 653 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 SATB2Q9UPW6 733 aa12.87□□□□□ -0.35
NCLN-201ENST00000246117 ANKRD61A6NGH8 418 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 UNC119BA6NIH7 251 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 TSPAN4O14817 238 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 HRO43593 1189 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 FMO6PO60774 539 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 ETV5P41161 510 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 CASP3P42574 277 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 ETV1P50549 477 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 SKP1P63208 163 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
NCLN-201ENST00000246117 LRRC37A5PQ49AS3 106 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 SLC22A18Q96BI1 424 aa12.86□□□□□ -0.35
NCLN-201ENST00000246117 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms