RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 F2RL3Q96RI0 385 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 RFXAPO00287 272 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SCAMP1O15126 338 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SDC3O75056 442 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 DCNP07585 359 aaKnown RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ERCC1P07992 297 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 CNKSR3Q6P9H4 555 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SH2D5Q6ZV89 423 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC9B2Q86UD5 537 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SERPINA12Q8IW75 414 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR6V1Q8N148 313 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 NDRG2Q9UN36 371 aaKnown RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 NUMBLQ9Y6R0 609 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 IGKV6D-21A0A0A0MT36 114 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 RPS19P39019 145 aaKnown RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 BTG1P62324 171 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 POU6F2P78424 691 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 APOOLQ6UXV4 268 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SYNPRQ8TBG9 265 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 NEDD4LQ96PU5 975 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ATP13A2Q9NQ11 1180 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 PRSS44E7EML9 344 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 UGDHO60701 494 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF254O75437 659 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 HRGP04196 525 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ADRB3P13945 408 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 TYRP14679 529 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 TGM4P49221 684 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 TP53I3Q53FA7 332 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 NXPE4Q6UWF7 544 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 NRROSQ86YC3 692 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 CAMKVQ8NCB2 501 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 OR5B12Q96R08 314 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC38A1Q9H2H9 487 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 C11orf49Q9H6J7 331 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 BRF2Q9HAW0 419 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 MEPEQ9NQ76 525 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-201ENST00000229330 ADAMTS5Q9UNA0 930 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 SLC6A5Q9Y345 797 aa13.06□□□□□ -0.32
HCFC2-201ENST00000229330 A0A0D9SG52 128 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CCL5P13501 91 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 JUNDP17535 347 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 PBX2P40425 430 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 IER5LQ5T953 404 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CD276Q5ZPR3 534 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 TIGD3Q6B0B8 471 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM107Q6UX40 140 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CSO75390 466 aaKnown RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 SORDQ00796 357 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 ITPRIPL2Q3MIP1 535 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF565Q8N9K5 539 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 TRIB2Q92519 343 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 FAM46BQ96A09 425 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 J3KTA2 159 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 SCDO00767 359 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 DNAJB6O75190 326 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 DRD2P14416 443 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CBLP22681 906 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 HERV-K104P61576 105 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 CLPPQ16740 277 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 AAK1Q2M2I8 961 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 C14orf28Q4W4Y0 310 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 TMEM150AQ86TG1 271 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 OR5AK2Q8NH90 309 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 SCAMP4Q969E2 229 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 TREX2Q9BQ50 279 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 A0A1B0GV50 99 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 GABRR3A8MPY1 467 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 E2F3O00716 465 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 LUMP51884 338 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 ELOAQ14241 798 aaKnown RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 OR4K14Q8NGD5 310 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 ZBED3Q96IU2 234 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 C11orf84Q9BUA3 381 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-201ENST00000229330 ERVMER34-1Q9H9K5 563 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 SDHAF2Q9NX18 166 aa13.05□□□□□ -0.32
HCFC2-201ENST00000229330 EPHA6Q9UF33 1036 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms