RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 SLC16A11Q8NCK7 471 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 OR52N2Q8NGI0 321 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 SCMH1Q96GD3 660 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 C16orf58Q96GQ5 468 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 COL21A1Q96P44 957 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 LIPT1Q9Y234 373 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 AP3M1Q9Y2T2 418 aa12.53□□□□□ -0.4
UPK1A-201ENST00000222275 KLF13Q9Y2Y9 288 aaPredicted RBP12.53□□□□□ -0.4
UPK1A-201ENST00000222275 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.4
UPK1A-201ENST00000222275 GTF3C1Q12789 2109 aa12.52□□□□□ -0.4
UPK1A-201ENST00000222275 C15orf38-AP3S2A0A0A6YYH1 394 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 ASPDHA6ND91 283 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 MRASO14807 208 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 SLC25A12O75746 678 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 OR6B1O95007 311 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 RASAL1O95294 804 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 IL33O95760 270 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 P04436 131 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 SP1P08047 785 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 GUSBP08236 651 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 ACP2P11117 423 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 COX4I1P13073 169 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 ATP6V1C1P21283 382 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 PTPN6P29350 595 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 CLK3P49761 638 aaKnown RBP12.52□□□□□ -0.41
UPK1A-201ENST00000222275 SNTA1Q13424 505 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 NNATQ16517 81 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 DUSP5Q16690 384 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
UPK1A-201ENST00000222275 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 C16orf62Q7Z3J2 963 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 ARPINQ7Z6K5 226 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 RNF130Q86XS8 419 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 CHERPQ8IWX8 916 aaKnown RBP12.52□□□□□ -0.41
UPK1A-201ENST00000222275 DIO2Q92813 273 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 TMBIM1Q969X1 311 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 OR7D2Q96RA2 312 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 YIPF4Q9BSR8 244 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 HOXD1Q9GZZ0 328 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 TSPAN10Q9H1Z9 355 aaPredicted RBP12.52□□□□□ -0.41
UPK1A-201ENST00000222275 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 SACM1LQ9NTJ5 587 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.41
UPK1A-201ENST00000222275 AKAP9Q99996 3911 aa12.52□□□□□ -0.41
UPK1A-201ENST00000222275 ANKRD33BA6NCL7 494 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 TSPAN2O60636 221 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ZNF354AO60765 605 aaPredicted RBP12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ZG16O60844 167 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 UNC5CO95185 931 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 CRATP43155 626 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 MAN2A2P49641 1150 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 HPCAP84074 193 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ART3Q13508 389 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ELOAQ14241 798 aaKnown RBP12.51□□□□□ -0.41
UPK1A-201ENST00000222275 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 REP15Q6BDI9 236 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.51□□□□□ -0.41
UPK1A-201ENST00000222275 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 METTL25Q8N6Q8 603 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 FAM13CQ8NE31 585 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 FAM110BQ8TC76 370 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 PAQR8Q8TEZ7 354 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 OIT3Q8WWZ8 545 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 PMM1Q92871 262 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 DTNBP1Q96EV8 351 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 RMND5BQ96G75 393 aaPredicted RBP12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 ADOQ96SZ5 270 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 CGREF1Q99674 301 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 HOPXQ9BPY8 73 aaPredicted RBP12.51□□□□□ -0.41
UPK1A-201ENST00000222275 OR51I1Q9H343 314 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 NDE1Q9NXR1 346 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 CALML5Q9NZT1 146 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 PKDREJQ9NTG1 2253 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 POLQO75417 2590 aa12.51□□□□□ -0.41
UPK1A-201ENST00000222275 TRBV5-3A0A0A0MS03 114 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 FBP2O00757 339 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 NME2P1O60361 137 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 STX11O75558 287 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 KCNK2O95069 426 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 SNX4O95219 450 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 HOXB9P17482 250 aaPredicted RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 GPX2P18283 190 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 ENDOUP21128 410 aaKnown RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 CNR1P21554 472 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 NME2P22392 152 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 RGNQ15493 299 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 ARHGAP11BQ3KRB8 267 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 DCST2Q5T1A1 773 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 SLC30A6Q6NXT4 461 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 TNFAIP8L2Q6P589 184 aaPredicted RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 GFRALQ6UXV0 394 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 HACD2Q6Y1H2 254 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms