RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 ZZZ3Q8IYH5 903 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 WDSUB1Q8N9V3 476 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 DOK4Q8TEW6 326 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 ISG20Q96AZ6 181 aaKnown RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 PDLIM5Q96HC4 596 aaKnown RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 CPEB1Q9BZB8 566 aaKnown RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 POLR2J2Q9GZM3 115 aaKnown RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 MS4A7Q9GZW8 240 aaPredicted RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 POLR2J3Q9H1A7 115 aaKnown RBP9.98□□□□□ -0.81
VPS18-201ENST00000220509 SLC22A11Q9NSA0 550 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 ZSCAN32Q9NX65 697 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 NKIRAS2Q9NYR9 191 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 MUTYHQ9UIF7 546 aa9.98□□□□□ -0.81
VPS18-201ENST00000220509 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 A0A1W2PQU0 124 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TRABD2BA6NFA1 517 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 AKAP8O43823 692 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 TOXO94900 526 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 BMP7P18075 431 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 GBX2P52951 348 aaPredicted RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 CAV3P56539 151 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 PRR5P85299 388 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 RUNX3Q13761 415 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TOR1AIP1Q5JTV8 583 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 C1orf94Q6P1W5 598 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 FGF13Q92913 245 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TADA1Q96BN2 335 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF689Q96CS4 500 aaPredicted RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 SLC38A2Q96QD8 506 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 COA4Q9NYJ1 87 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 RNF24Q9Y225 148 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TAPBPO15533 448 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 GRK5P34947 590 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 SUOXP51687 545 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 MTAPQ13126 283 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 IHHQ14623 411 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 SMAD2Q15796 467 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 ITPRIPL2Q3MIP1 535 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 LAIR1Q6GTX8 287 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 C8orf82Q6P1X6 216 aaPredicted RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF551Q7Z340 670 aaPredicted RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 NUP54Q7Z3B4 507 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF683Q8IZ20 524 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 RELTQ969Z4 430 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 YIPF6Q96EC8 236 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 MEGF10Q96KG7 1140 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 NPAS1Q99742 590 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 PPIL3Q9H2H8 161 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 SLC6A13Q9NSD5 602 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 KLHL9Q9P2J3 617 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF225Q9UK10 706 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 SIP14410 1827 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 VCANP13611 3396 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZNF860A6NHJ4 632 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 CLDN4O14493 209 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 MED6O75586 246 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 WDPCPO95876 746 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 NR2F6P10588 404 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 PTGER1P34995 402 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 BTN3A2P78410 334 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS18-201ENST00000220509 LAIR2Q6ISS4 152 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 CLRN3Q8NCR9 226 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 GSDMCQ9BYG8 508 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 RC3H2Q9HBD1 1191 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 IL21Q9HBE4 155 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 RDH14Q9HBH5 336 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 DCAF13Q9NV06 445 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 OR6C2Q9NZP2 312 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 TMEFF2Q9UIK5 374 aaPredicted RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 SSR3Q9UNL2 185 aa9.97□□□□□ -0.81
VPS18-201ENST00000220509 ZFR2Q9UPR6 939 aaKnown RBP9.97□□□□□ -0.81
VPS18-201ENST00000220509 A0A1B0GVC2 190 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 A6NIN4 97 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 H3BNC9 293 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 SMAD9O15198 467 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 SRPRAP08240 638 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 LAMP2P13473 410 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 HNF1AP20823 631 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 STXBP1P61764 594 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 ID2Q02363 134 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 EIF4HQ15056 248 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 ZNHIT3Q15649 155 aaPredicted RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 AANATQ16613 207 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 HNRNPA1L2Q32P51 320 aaKnown RBP9.96□□□□□ -0.81
VPS18-201ENST00000220509 FLYWCH1Q4VC44 716 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 CLEC12AQ5QGZ9 265 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 NAGSQ8N159 534 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 ZFP41Q8N8Y5 198 aa9.96□□□□□ -0.81
VPS18-201ENST00000220509 AQP11Q8NBQ7 271 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms