RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CIDECQ96AQ7 238 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 RRNAD1Q96FB5 475 aaKnown RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 SYT4Q9H2B2 425 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 MEPEQ9NQ76 525 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-201ENST00000219334 USP3Q9Y6I4 520 aa17.89■□□□□ 0.45
SMPD3-201ENST00000219334 GFRA2O00451 464 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 FBP2O00757 339 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 YKT6O15498 198 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 SNAPC5O75971 98 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 BMP4P12644 408 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 CSNK1A1P48729 337 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 AFF3P51826 1226 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MZT1Q08AG7 82 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 AWAT2Q6E213 333 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 SLC22A16Q86VW1 577 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 OR5J2Q8NH18 312 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ADOQ96SZ5 270 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 CA5BQ9Y2D0 317 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 A0A1B0GTW7 788 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MEGF11A6BM72 1044 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 CENPBD1B2RD01 187 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 RNASET2O00584 256 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 SCRG1O75711 98 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 HOXD9P28356 352 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 AKR1C2P52895 323 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ZXDBP98169 803 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 RPS26P11Q5JNZ5 115 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 OR52R1Q8NGF1 315 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 TCTN2Q96GX1 697 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 HCAR1Q9BXC0 346 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 PINK1Q9BXM7 581 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ENKD1Q9H0I2 346 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 DKK3Q9UBP4 350 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 F5H5K5 113 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 INMT-MINDY4F8WBC2 141 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 RFXAPO00287 272 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 EEF1E1O43324 174 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 HTR3BO95264 441 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ACPPP15309 386 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 PRLHRP49683 370 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 XKRXQ6PP77 449 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF765Q7L2R6 523 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 SAMD8Q96LT4 415 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 DPH1Q9BZG8 443 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 KLHL13Q9P2N7 655 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 RRP8O43159 456 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 IFNA2P01563 188 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 LPLP06858 475 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 STSP08842 583 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 LCN1P31025 176 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 GMPRP36959 345 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 SOX3P41225 446 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF140P52738 457 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MANEAQ5SRI9 462 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 C22orf42Q6IC83 251 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 OR5AK2Q8NH90 309 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 PTERQ96BW5 349 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 METTL2AQ96IZ6 378 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 KLHL15Q96M94 604 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ANKRD30BLA7E2S9 258 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 AURKAO14965 403 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MAP2K4P45985 399 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 HSD17B7P56937 341 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 TRA2BP62995 288 aaKnown RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 DMWDQ09019 674 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF431Q8TF32 576 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-201ENST00000219334 TBC1D20Q96BZ9 403 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 MACROD1Q9BQ69 325 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 CAMK2AQ9UQM7 478 aa17.88■□□□□ 0.45
SMPD3-201ENST00000219334 FAM189BP81408 668 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 EIF2B1Q14232 305 aaKnown RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 RBM39Q14498 530 aaKnown RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 HSF5Q4G112 596 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 PLEK2Q9NYT0 353 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 PRKYO43930 277 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 PRLP01236 227 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 HMGN2P05204 90 aaKnown RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 ART1P52961 327 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 RPE65Q16518 533 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 TRIM61Q5EBN2 209 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 DCST2Q5T1A1 773 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 DYNLRB1Q9NP97 96 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 NGBQ9NPG2 151 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 DNAJB5O75953 348 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 GLO1Q04760 184 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 RAB41Q5JT25 222 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 ANKK1Q8NFD2 765 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 IL20RAQ9UHF4 553 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 M0R3H8 397 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 OSMP13725 252 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 DCAF7P61962 342 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF45Q02386 682 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 C3orf38Q5JPI3 329 aa17.87■□□□□ 0.45
SMPD3-201ENST00000219334 ZNF784Q8NCA9 323 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 SOX17Q9H6I2 414 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-201ENST00000219334 CLCA1A8K7I4 914 aa17.86■□□□□ 0.45
SMPD3-201ENST00000219334 CASC3O15234 703 aaKnown RBP17.86■□□□□ 0.45
SMPD3-201ENST00000219334 SIGLEC6O43699 453 aa17.86■□□□□ 0.45
SMPD3-201ENST00000219334 CEACAM7Q14002 265 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms