RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CTNNB1P35222 781 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 IL12RB1P42701 662 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 CLDN20P56880 219 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 P2RY14Q15391 338 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 EOGTQ5NDL2 527 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 VASNQ6EMK4 673 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 HEPHL1Q6MZM0 1159 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 VASH1Q7L8A9 365 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 NKAIN4Q8IVV8 208 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 NRMQ8IXM6 262 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 OR9A2Q8NGT5 310 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 SPPL3Q8TCT6 385 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 OTULINQ96BN8 352 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 GIMAP5Q96F15 307 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 SLC41A3Q96GZ6 507 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 SECISBP2Q96T21 854 aaKnown RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 MARVELD1Q9BSK0 173 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 KCNN2Q9H2S1 579 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 NIPAL2Q9H841 368 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 POLMQ9NP87 494 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 KRCC1Q9NPI7 259 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 EQTNQ9NQ60 294 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ACOXLQ9NUZ1 547 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 H2AFY2Q9P0M6 372 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 OR1A2Q9Y585 309 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ZNF780BQ9Y6R6 833 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 FAM240BA0A1B0GVZ2 78 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 J3QRE1 110 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 PRICKLE3O43900 615 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 NTN1O95631 604 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 AGR2O95994 175 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 NDUFV2P19404 249 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 DRD3P35462 400 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ATP6V1E1P36543 226 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 GPR4P46093 362 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 ERVK-21P61565 698 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 FAM214AQ32MH5 1076 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ZNF791Q3KP31 576 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 GDF7Q7Z4P5 450 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 GID4Q8IVV7 300 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 NLGN4YQ8NFZ3 816 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 OR2L3Q8NG85 312 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 SENP5Q96HI0 755 aaPredicted RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 MCHR1Q99705 422 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 BEX2Q9BXY8 128 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 LYARQ9NX58 379 aaKnown RBP12.44□□□□□ -0.42
SRP54-201ENST00000216774 TNFRSF10DQ9UBN6 386 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 ALG5Q9Y673 324 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 A0A1W2PS29 197 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 SHISA3A0PJX4 238 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 ORC5O43913 435 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 SLC43A1O75387 559 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 RGS9O75916 674 aaPredicted RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 NCR1O76036 304 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 ALX3O95076 343 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 PCDH8O95206 1070 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 MTNR1BP49286 362 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 STXBP1P61764 594 aaKnown RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 FAPQ12884 760 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 ADAM15Q13444 863 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 KRT33BQ14525 404 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 AGBL4Q5VU57 503 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 TMEM91Q6ZNR0 172 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 TRILQ7L0X0 811 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 NRROSQ86YC3 692 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 YIPF7Q8N8F6 280 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 MFSD9Q8NBP5 474 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 BBS1Q8NFJ9 593 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 OR52E1Q8NGJ3 308 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 UBL7Q96S82 380 aaPredicted RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 PHPT1Q9NRX4 125 aaPredicted RBP12.43□□□□□ -0.42
SRP54-201ENST00000216774 NTMQ9P121 344 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 MALT1Q9UDY8 824 aa12.43□□□□□ -0.42
SRP54-201ENST00000216774 TBC1D3BA6NDS4 549 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 OR6C70A6NIJ9 312 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 KCNJ13O60928 360 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 C1QBP02746 253 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 THY1P04216 161 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 INPP1P49441 399 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 PDX1P52945 283 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FZD5Q13467 585 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 TNK1Q13470 666 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 MADCAM1Q13477 382 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 IRF4Q15306 451 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 Q5BKY6 102 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FAM20CQ8IXL6 584 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 BRIX1Q8TDN6 353 aaKnown RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 ADAMTS15Q8TE58 950 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms