RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MBOAT2Q6ZWT7 520 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 GDF7Q7Z4P5 450 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 GKN2Q86XP6 184 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 KIF18BQ86Y91 864 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SFTPA2Q8IWL1 248 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 NRMQ8IXM6 262 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PROKR2Q8NFJ6 384 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ADAMTS18Q8TE60 1221 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CHPT1Q8WUD6 406 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF582Q96NG8 517 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 OPALINQ96PE5 141 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 GPA33Q99795 319 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PRR14Q9BWN1 585 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PHF7Q9BWX1 381 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TPSD1Q9BZJ3 242 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PLA2G12AQ9BZM1 189 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 IL21RQ9HBE5 538 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 EXOSC4Q9NPD3 245 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SLC2A4RGQ9NR83 387 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 STARD5Q9NSY2 213 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM74BQ9NUR3 256 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 C14orf105Q9NVL8 296 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 IRAK4Q9NWZ3 460 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 NLGN3Q9NZ94 848 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SLC7A7Q9UM01 511 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 DIMT1Q9UNQ2 313 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CHST2Q9Y4C5 530 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PMF1-BGLAPU3KQ54 211 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 HYKKA2RU49 373 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TRAPPC13A5PLN9 417 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CHURC1-FNTBB4DL54 471 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MBTPS2O43462 519 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CKMT1AP12532 417 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 NID1P14543 1247 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 RPS4Y1P22090 263 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PSMA1P25786 263 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 BMP8BP34820 402 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 EEF1A1P68104 462 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 RAB40BQ12829 278 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MLLT11Q13015 90 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TDGQ13569 410 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 EXOSC7Q15024 291 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MINDY4Q4G0A6 757 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CLEC12AQ5QGZ9 265 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MRPL2Q5T653 305 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ACSM5Q6NUN0 579 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 DCDC5Q6ZRR9 648 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 BCDIN3DQ7Z5W3 292 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MEX3DQ86XN8 651 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 NKAIN4Q8IVV8 208 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 GALNT12Q8IXK2 581 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MFSD4AQ8N468 514 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 MINDY2Q8NBR6 621 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM52Q8NDY8 209 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SIMC1Q8NDZ2 872 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 OR9A4Q8NGU2 314 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PIK3R3Q92569 461 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 PMM1Q92871 262 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 RFKQ969G6 155 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CENPOQ9BU64 300 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TAPBPLQ9BX59 468 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 ALOXE3Q9BYJ1 711 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SAP130Q9H0E3 1048 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 EVA1AQ9H8M9 152 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 POLE3Q9NRF9 147 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 SEC14L4Q9UDX3 406 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 TESQ9UGI8 421 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 FBXL21Q9UKT6 434 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 LSM2Q9Y333 95 aaKnown RBP7.7□□□□□ -1.18
VAMP3-201ENST00000054666 CDH10Q9Y6N8 788 aa7.7□□□□□ -1.18
VAMP3-201ENST00000054666 IGHV1OR15-9A0A0B4J2B8 117 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 BLACEA4D250 179 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SULT1C4O75897 302 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SLC35E2P0CK97 266 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 CHRNB1P11230 501 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RNH1P13489 461 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 GNSP15586 552 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 CD40LGP29965 261 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 GABRA3P34903 492 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 GRK5P34947 590 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SOX3P41225 446 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RANBP1P43487 201 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 CAPZBP47756 277 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 MAZP56270 477 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 STX4Q12846 297 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 SLC13A2Q13183 592 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 COL9A2Q14055 689 aaPredicted RBP7.69□□□□□ -1.18
VAMP3-201ENST00000054666 PGGHGQ32M88 737 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 C3orf38Q5JPI3 329 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 TUBA3EQ6PEY2 450 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 FIGNL1Q6PIW4 674 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF620Q6ZNG0 422 aa7.69□□□□□ -1.18
VAMP3-201ENST00000054666 GDPGP1Q6ZNW5 385 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms