RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 BNC1Q01954 994 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FAM111BQ6SJ93 734 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 LRRC25Q8N386 305 aaPredicted RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 OR4F15Q8NGB8 312 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 MSLNLQ96KJ4 702 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FOXN4Q96NZ1 517 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 DGAT2Q96PD7 388 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CTRCQ99895 268 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 BRF2Q9HAW0 419 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 MAN2B2Q9Y2E5 1009 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 NAALAD2Q9Y3Q0 740 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 H0YIV9 168 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FAAHO00519 579 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 EIF1AYO14602 144 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 XKRYO14609 159 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CHST10O43529 356 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 AKAP8O43823 692 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 UGT2B7P16662 529 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 LIPAP38571 399 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 RAB14P61106 215 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CSNK1G2P78368 415 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ENTHD1Q8IYW4 607 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 GJD3Q8N144 294 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 LRRC17Q8N6Y2 441 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 TRUB1Q8WWH5 349 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CRELD1Q96HD1 420 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 DOCK4Q8N1I0 1966 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 LOC100509620A0A075B734 347 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 C1orf226A1L170 272 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 NR4A2P43354 598 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 OMPP47874 163 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CD97P48960 835 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ADPRMQ3LIE5 342 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 ALKBH2Q6NS38 261 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FAM180AQ6UWF9 173 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 NAXEQ8NCW5 288 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 OR13F1Q8NGS4 319 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 FANK1Q8TC84 345 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
CHPF2-201ENST00000035307 GPC6Q9Y625 555 aaPredicted RBP11.32□□□□□ -0.6
CHPF2-201ENST00000035307 CLDN24A6NM45 220 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 FAM25EA8MYX2 175 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 EDNRAP25101 427 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 MTNR1AP48039 350 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 ISL1P61371 349 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 LINC01555Q8NAE3 123 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 CCDC115Q96NT0 180 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 SLC7A7Q9UM01 511 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 CORINQ9Y5Q5 1042 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 ROS1P08922 2347 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 TMEM150CB9EJG8 249 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PLRG1O43660 514 aaKnown RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 WBP4O75554 376 aaKnown RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 RAB36O95755 333 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 OSMP13725 252 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 BCKDHBP21953 392 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 IL12BP29460 328 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 DCDC5Q6ZRR9 648 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PROKR2Q8NFJ6 384 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 OR56A3Q8NH54 315 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 NARS2Q96I59 477 aaKnown RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 ZFYVE21Q9BQ24 234 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 MMP28Q9H239 520 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 MMP27Q9H306 513 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 MKKSQ9NPJ1 570 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 ICKQ9UPZ9 632 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 TMPRSS11DO60235 418 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 UGDHO60701 494 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PLGP00747 810 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-201ENST00000035307 HMGN1P05114 100 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 ST6GAL1P15907 406 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 RPA4Q13156 261 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PAQR6Q6TCH4 344 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 SLC36A4Q6YBV0 504 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 SUN3Q8TAQ9 357 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 WDR20Q8TBZ3 569 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 THEM6Q8WUY1 208 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 SMURF1Q9HCE7 757 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 PHF11Q9UIL8 331 aa11.31□□□□□ -0.6
CHPF2-201ENST00000035307 MUC6Q6W4X9 2439 aa11.3□□□□□ -0.6
CHPF2-201ENST00000035307 NPC1O15118 1278 aa11.3□□□□□ -0.6
CHPF2-201ENST00000035307 SCO2O43819 266 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms