RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Clba1Q8BHN9 321 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr1491Q8VEZ5 319 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Olfr535Q8VGL3 312 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ces2cQ91WG0 561 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Cd209dQ91ZW8 237 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Aif1lQ9EQX4 150 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Ntn4Q9JI33 628 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Tcea2Q9QVN7 299 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Mapk9Q9WTU6 423 aa10.71□□□□□ -0.69
Topbp1-201ENSMUST00000035164 Rpl7a-ps5A0A140T8L3 268 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 5830473C10RikF8VQ07 620 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn1r176G3UW31 304 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mtnd5P03921 607 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nr2f6P43136 390 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 AcadlP51174 430 aaKnown RBP10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Adamts19P59509 1210 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 UrodP70697 367 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 AmbpQ07456 349 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mccc2Q3ULD5 563 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cd6Q61003 665 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mep1bQ61847 704 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 DbhQ64237 622 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cxcl16Q8BSU2 246 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gpr26Q8BZA7 337 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr1020Q8VFK7 317 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Acox3Q9EPL9 700 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr653E9PVA0 317 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr544E9PX47 334 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gtpbp1O08582 668 aaKnown RBP10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rrm2bQ6PEE3 351 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rims3Q80U57 307 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Dtx3Q80V91 347 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mab21l2Q8BPP1 359 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Slc22a12Q8CFZ5 553 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pcdhga12Q91XY7 932 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Rnf181Q9CY62 165 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Sohlh2Q9D489 467 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 4930578G10RikQ9D4Q4 153 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fgf22Q9ESS2 162 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Map2k5Q9WVS7 448 aa10.71□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Igkv5-43A0A0B4J1J2 115 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Wscd2D4PHA7 571 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 PtprhE9Q0N2 971 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nrxn2E9Q7X7 1710 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm8871F7AXK2 190 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nthl1O35980 300 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nfatc1O88942 717 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gstm5P48774 224 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Serpina3mQ03734 418 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cntnap5bQ0V8T8 1292 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cr1lQ64735 483 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ube2q1Q7TSS2 422 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 TtpaQ8BWP5 278 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fgd2Q8BY35 655 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Wdr26Q8C6G8 641 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Kctd20Q8CDD8 419 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Wdr54Q9R0D8 334 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn2r56E9Q4U5 779 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nkx1-1G3UXB3 402 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Zfp934K7N6H3 473 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 IlkO55222 452 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Kcnn3P58391 732 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 MyorgQ69ZQ1 716 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Olfr63Q8VBW9 316 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tmem5Q8VDX6 444 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Laptm4bQ91XQ6 227 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Sfxn2Q925N2 322 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Prdm9Q96EQ9 843 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 MtapQ9CQ65 283 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cers5Q9D6K9 414 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 PrkraQ9WTX2 313 aaKnown RBP10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ankrd16A2AS55 361 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vmn2r98E9PZ56 857 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gpr31F8VQN3 319 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm5849J3QPE5 117 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 MbpP04370 250 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 SrgnP13609 152 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Tcea3P23881 347 aaKnown RBP10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 DctP29812 517 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cd28P31041 218 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cdh11P55288 796 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Nkx3-2P97503 333 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gm14226Q3TZL0 686 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Ccdc190Q3URK1 288 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Slc47a2Q3V050 573 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Clrn1Q8K445 232 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Gpr146Q99LE2 333 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Cyp4f15Q99N18 534 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Auts2A0A087WPF7 1261 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mgl2A9XX86 381 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Zfp395E9Q5N9 508 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Lhx8O35652 367 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Bnip2O54940 326 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Crybb2P62696 205 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Mtmr11Q3V1L6 700 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 CtsoQ8BM88 312 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Pdlim5Q8CI51 591 aaKnown RBP10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Spp2Q8K1I3 203 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Fbxo45Q8K3B1 286 aa10.7□□□□□ -0.7
Topbp1-201ENSMUST00000035164 Vopp1Q8R1C3 172 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms