RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ndufv2Q9D6J6 248 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Eif4e3Q9DBB5 207 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Nusap1Q9ERH4 427 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Ssna1Q9JJ94 119 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Lpar2Q9JL06 348 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Ino80eA0A0U1RP99 260 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Olfr1082A0A1L1SUC9 313 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Rhox2bA2A447 191 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Rhox2cA2AWL9 191 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Ptrhd1D3Z4S3 140 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Chst13D3Z6E3 336 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Galnt1O08912 559 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Kcnn3P58391 732 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Mtf1Q07243 675 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Tmem64Q3U145 381 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 MthfsdQ3URQ7 372 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Vmn1r223Q5SSA0 361 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Ppp3r1Q63810 170 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 H2-M10.2Q85ZW9 329 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Lypd4Q8BVP6 246 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Itpk1Q8BYN3 419 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Ankmy1Q8C0W1 906 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gtpbp3Q923K4 492 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Xylt2Q9EPL0 865 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Cts8Q9JI81 333 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Prokr1Q9JKL1 393 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Cyhr1Q9QXA1 311 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Abhd1Q9QZC8 412 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 F8Q06194 2319 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Tmem185aA2AF53 350 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 DytnA2CI98 653 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Acbd4E9Q289 327 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Fbxw28E9Q8A4 466 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Stxbp1O08599 594 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 PargO88622 969 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Dnajb5O89114 348 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Nr2f6P43136 390 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Fv1P70213 459 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 St3gal3P97325 374 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Anxa11P97384 503 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 CamkmtQ3U2J5 323 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gpr55Q3UJF0 327 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Olfr304Q7TS03 333 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Slitrk4Q810B8 837 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Mptx1Q8R1M8 219 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Olfr853Q8VGG6 305 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Sh3bp4Q921I6 962 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Glipr1l1Q9DAG6 236 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Adam28Q9JLN6 793 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 PrkraQ9WTX2 313 aaKnown RBP10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Lamb2Q61292 1799 aa10.12□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Pgm2A2CEK3 580 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Trmt1lA2RSY6 728 aaKnown RBP10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Olfr610E9Q598 315 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gm14139F6ZS36 494 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Vmn2r99H3BK37 856 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 KeraO35367 351 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 ChadO55226 358 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Rdh5O55240 318 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Cdh11P55288 796 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Polr2lP62876 67 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 QrfprP83861 433 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 IhhP97812 411 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 DtymkP97930 212 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Samd12Q0VE29 161 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Dcdc2Q5DU00 475 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 MeikinQ5F2C3 434 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Bhlha9Q5RJB0 231 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Laptm5Q61168 261 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Meig1Q61845 88 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 ManeaQ6NXH2 462 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Zfp180Q6NZI9 655 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Fastkd5Q7TMV3 762 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Eif1axQ8BMJ3 144 aaKnown RBP10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Rad51ap1Q8C551 337 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Slc16a13Q8CE94 428 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Hpf1Q8CFE2 346 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Mchr1Q8JZL2 353 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Unc5dQ8K1S2 956 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Aspscr1Q8VBT9 550 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Mtmr14Q8VEL2 648 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Galnt11Q921L8 608 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Taar1Q923Y8 332 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Slc8b1Q925Q3 585 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 NanpQ9CPT3 248 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Trpv4Q9EPK8 871 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Syt8Q9R0N6 395 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gm5938A2AEN9 163 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Olfr727A2RTN7 324 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gm9008E9PVG0 424 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gm3633L7N233 213 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Gm9611L7N476 213 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Capn1O35350 713 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Hoxa9P09631 271 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 HmgclP38060 325 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Cmklr1P97468 371 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Mrpl10Q3TBW2 262 aaKnown RBP10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Cyb5r4Q3TDX8 528 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Trappc13Q3TIR1 417 aa10.11□□□□□ -0.79
Rnf40-201ENSMUST00000033088 Nxt2Q3UNA4 142 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms