RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 S1PR1P21453 382 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 MATN1P21941 496 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 PGM1P36871 562 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 CRATP43155 626 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 GSK3BP49841 420 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 MVDP53602 400 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 EEFSECP57772 596 aaKnown RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 SLC26A5P58743 744 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 LIPEQ05469 1076 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 FADDQ13158 208 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 RGNQ15493 299 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 SAMD4BQ5PRF9 694 aaKnown RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 TNFAIP8L2Q6P589 184 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 KIRREL2Q6UWL6 708 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 MRGPREQ86SM8 312 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 GALNT16Q8N428 558 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 HORMAD2Q8N7B1 307 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 RNF148Q8N7C7 305 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF615Q8N8J6 731 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 NFAM1Q8NET5 270 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR11G2Q8NGC1 345 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR5D16Q8NGK9 328 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR1N1Q8NGS0 311 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR10A6Q8NH74 314 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 C16orf52Q8NHV5 167 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 VMP1Q96GC9 406 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 SENP5Q96HI0 755 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 CLPTM1LQ96KA5 538 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 VSTM2LQ96N03 204 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR7D2Q96RA2 312 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ECSITQ9BQ95 431 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 YIPF4Q9BSR8 244 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ITPAQ9BY32 194 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ACTRT3Q9BYD9 372 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 OR51I1Q9H343 314 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ALG2Q9H553 416 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 KAT8Q9H7Z6 458 aaKnown RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 FOLH1BQ9HBA9 442 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF160Q9HCG1 818 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 PRODH2Q9UF12 536 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 FBXL4Q9UKA2 621 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 DTX4Q9Y2E6 619 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 NSG1A0A0A6YYJ2 146 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 TRBV11-1A0A0K0K1C0 115 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 PRORSD1PA6NEY8 169 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 OR6C76A6NM76 312 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 NUDT7P0C024 238 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ACP2P11117 423 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 GPX2P18283 190 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 MAGEA8P43361 318 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 EMDP50402 254 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ANXA11P50995 505 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 SLC37A1P57057 533 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 DSTNP60981 165 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 KCNJ2P63252 427 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 TXNL4AP83876 142 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ATP1A4Q13733 1029 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CEACAM7Q14002 265 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 EBPQ15125 230 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ZNHIT3Q15649 155 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 DUSP5Q16690 384 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF630Q2M218 657 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 PIGGQ5H8A4 983 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CRB2Q5IJ48 1285 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CDC73Q6P1J9 531 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ZCCHC12Q6PEW1 402 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 RPTNQ6XPR3 784 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 Q6ZS92 163 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 NDUFAF7Q7L592 441 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 SLC29A4Q7RTT9 530 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 WDR53Q7Z5U6 358 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 NET1Q7Z628 596 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 SERPINA11Q86U17 422 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 IFNEQ86WN2 208 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CALHM3Q86XJ0 350 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 C9orf40Q8IXQ3 194 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ZZZ3Q8IYH5 903 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ULK2Q8IYT8 1036 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 LGI4Q8N135 537 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ARHGAP24Q8N264 748 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF808Q8N4W9 903 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 AMER2Q8N7J2 671 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CDRT4Q8N9R6 151 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 FAM156AQ8NDB6 213 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 OR2T12Q8NG77 320 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 MIPOL1Q8TD10 442 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ADAMTS15Q8TE58 950 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 SLC9A6Q92581 669 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 RAB8BQ92930 207 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 NACC2Q96BF6 587 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CCDC124Q96CT7 223 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 REXO5Q96IC2 774 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 GAL3ST4Q96RP7 486 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 KCTD14Q9BQ13 255 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 SPATA9Q9BWV2 254 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 PIF1Q9H611 641 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms