RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PRPS2P11908 318 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 IGFBP2P18065 325 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 EFNA1P20827 205 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 SRD5A2P31213 254 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 HPCAL1P37235 193 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 SERPINB4P48594 390 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 PRKAG1P54619 331 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 HSPB2Q16082 182 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 SLC25A35Q3KQZ1 300 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 R3HCC1LQ7Z5L2 792 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 IFNEQ86WN2 208 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 LURAP1LQ8IV03 231 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 TNIP2Q8NFZ5 429 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 OR4K17Q8NGC6 315 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 OR6Y1Q8NGX8 325 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 RNF138Q8WVD3 245 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 ZBTB9Q96C00 473 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 MTERF3Q96E29 417 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 C3orf30Q96M34 536 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 TRIB1Q96RU8 372 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 TREX2Q9BQ50 279 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 C1orf50Q9BV19 199 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 C3orf14Q9HBI5 128 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 FLRT3Q9NZU0 649 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 PPP4R1LQ9P1A2 415 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
CACNA1A-259ENST00000638114 TTC36A6NLP5 189 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 C17orf51A8MQB3 221 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 HSPA4LO95757 839 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 DDX5P17844 614 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 TCEA1P23193 301 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 GABRA3P34903 492 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 FRKP42685 505 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 GAS1P54826 345 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 PSMD4P55036 377 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 RCAN2Q14206 197 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 C6orf136Q5SQH8 315 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 CEP85LQ5SZL2 805 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 NSUN5P2Q63ZY6 315 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 ENPP6Q6UWR7 440 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 LRIG3Q6UXM1 1119 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 EXOC3L1Q86VI1 746 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 TRIM42Q8IWZ5 723 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 FNDC5Q8NAU1 212 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 NUP43Q8NFH3 380 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 CEP70Q8NHQ1 597 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 GPR151Q8TDV0 419 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 C14orf79Q96F83 325 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 RMND5BQ96G75 393 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 LURAP1Q96LR2 239 aa15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 ACSS1Q9NUB1 689 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-259ENST00000638114 TACC2O95359 2948 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 GXYLT2A0PJZ3 443 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 H0Y3Z8 333 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SCAMP2O15127 329 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 FADS1O60427 444 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 LYPLA1O75608 230 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 KCNH1O95259 989 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 IL33O95760 270 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 IL2RAP01589 272 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SERPINE1P05121 402 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 BMP5P22003 454 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 DPP4P27487 766 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 TIMP3P35625 211 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 RPL3P39023 403 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 CLK3P49761 638 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 TLE4Q04727 773 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SRYQ05066 204 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 STX5Q13190 355 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 CHI3L2Q15782 390 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 VPS26BQ4G0F5 336 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 AAGABQ6PD74 315 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 DMRTC2Q8IXT2 367 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 OR7A2PQ8NGA2 310 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 FBXO30Q8TB52 745 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 PIK3R3Q92569 461 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SLC9A6Q92581 669 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 TUBGCP3Q96CW5 907 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SFXN2Q96NB2 322 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 MS4A4EQ96PG1 132 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SSU72Q9NP77 194 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 SDHAF3Q9NRP4 125 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 FAM120CQ9NX05 1096 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 ATP6V1HQ9UI12 483 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 ABCG2Q9UNQ0 655 aa15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 RPH3AQ9Y2J0 694 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-259ENST00000638114 CD8B2A6NJW9 211 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 ENO4A6NNW6 628 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 B4DXG7 233 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 DVL2O14641 736 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 TM9SF1O15321 606 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 EMC8O43402 210 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 ITM2AO43736 263 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 UTS2O95399 124 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 TUBBP07437 444 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 CPN1P15169 458 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 CEACAM8P31997 349 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 GFRA1P56159 465 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms