RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SZRD1Q7Z422 152 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 ZZZ3Q8IYH5 903 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 CLHC1Q8NHS4 586 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 AGR3Q8TD06 166 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 RNF138Q8WVD3 245 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 TWIST2Q8WVJ9 160 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 RNASE6Q93091 150 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 CIDECQ96AQ7 238 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 ZBED6CLQ96FA7 236 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 FCRL1Q96LA6 429 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 TUBA1CQ9BQE3 449 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 C3orf14Q9HBI5 128 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 SDHAF3Q9NRP4 125 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 TRAF6Q9Y4K3 522 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 NINQ8N4C6 2090 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 POLQO75417 2590 aa13.63□□□□□ -0.23
CACNA1A-230ENST00000636768 PDZD2O15018 2839 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 SYT5O00445 386 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 LSM1O15116 133 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 KCNH1O95259 989 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 IFI6P09912 130 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 TMIGD3P0DMS9 266 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 PRPS2P11908 318 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 OPRM1P35372 400 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 STARP49675 285 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 CLK3P49761 638 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 GAS1P54826 345 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 MANFP55145 182 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 GAB1Q13480 694 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 ZCCHC23Q6ZST2 131 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 TCP10LQ8TDR4 215 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 AENQ8WTP8 325 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 ZNF764Q96H86 408 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 TM9SF2Q99805 663 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 SH3GL2Q99962 352 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 LMF2Q9BU23 707 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 ROPN1BQ9BZX4 212 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 DSN1Q9H410 356 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 ROPN1Q9HAT0 212 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 FAM120CQ9NX05 1096 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 BAIAP2L1Q9UHR4 511 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 FOXD3Q9UJU5 478 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 ABCG2Q9UNQ0 655 aa13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 MRPS18CQ9Y3D5 142 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-230ENST00000636768 CLCA1A8K7I4 914 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 FADS1O60427 444 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 IL33O95760 270 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 FGF4P08620 206 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 CHMP24386 653 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 MAPK1P28482 360 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 GABRA3P34903 492 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 ASMTP46597 345 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 LHX2P50458 406 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 PRKAG1P54619 331 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 DSCR4P56555 118 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 FBXL19-AS1Q494R0 122 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 VPS26BQ4G0F5 336 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 ZNF385BQ569K4 471 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 RAET1LQ5VY80 246 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 POMZP3Q6PJE2 187 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 GPR151Q8TDV0 419 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 TBL1XR1Q9BZK7 514 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 PTGES2Q9H7Z7 377 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 FLRT3Q9NZU0 649 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 CRIM1Q9NZV1 1036 aa13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 INTS1Q8N201 2190 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-230ENST00000636768 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 GXYLT2A0PJZ3 443 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 TMEM114B3SHH9 223 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 ZIC3O60481 467 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 TBX19O60806 448 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 UTS2O95399 124 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 IL18BPO95998 194 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 BCKDHAP12694 445 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 ZNF708P17019 499 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 HK1P19367 917 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 HPCAL1P37235 193 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 PDE7AQ13946 482 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 GANABQ14697 944 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 FLYWCH1Q4VC44 716 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 WDR93Q6P2C0 686 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 PLXDC2Q6UX71 529 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 CHMP1BQ7LBR1 199 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 MARCH3Q86UD3 253 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 KIF18BQ86Y91 864 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 GRAMD2AQ8IUY3 354 aa13.6□□□□□ -0.23
CACNA1A-230ENST00000636768 UBQLNLQ8IYU4 475 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms