RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CLEC4MQ9H2X3 399 aaPredicted RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 PTGES2Q9H7Z7 377 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 ABCG2Q9UNQ0 655 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 RPH3AQ9Y2J0 694 aaPredicted RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 MRPS18CQ9Y3D5 142 aaKnown RBP16.28■□□□□ 0.2
PNKP-225ENST00000636214 ABCA4P78363 2273 aa16.28■□□□□ 0.2
PNKP-225ENST00000636214 CLCA1A8K7I4 914 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 TRIM13O60858 407 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 KCNH1O95259 989 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 TACR1P25103 407 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 STARP49675 285 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 ART1P52961 327 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 EEF1A1P68104 462 aaKnown RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 PSG6Q00889 435 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 IFFO1Q0D2I5 559 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 HSPB3Q12988 150 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 STX5Q13190 355 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 GANABQ14697 944 aaKnown RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 VPS26BQ4G0F5 336 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 EEF1A1P5Q5VTE0 462 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 RAET1LQ5VY80 246 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 SZRD1Q7Z422 152 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 OR2L13Q8N349 312 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 RIBC1Q8N443 379 aaPredicted RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 WNT2BQ93097 391 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 GFM2Q969S9 779 aaKnown RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 PPCDCQ96CD2 204 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 ELP4Q96EB1 424 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 CCT7Q99832 543 aa16.27■□□□□ 0.2
PNKP-225ENST00000636214 C12orf65Q9H3J6 166 aaKnown RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 EML4Q9HC35 981 aaKnown RBP16.27■□□□□ 0.2
PNKP-225ENST00000636214 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.19
PNKP-225ENST00000636214 MED12LQ86YW9 2145 aa16.27■□□□□ 0.19
PNKP-225ENST00000636214 A6NNC1 897 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 UPK1AO00322 258 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 CTAG2O75638 210 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 HK1P19367 917 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 PRPH2P23942 346 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 LHX2P50458 406 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 DIO3P55073 304 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 GFRA1P56159 465 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 RPL38P63173 70 aaKnown RBP16.26■□□□□ 0.19
PNKP-225ENST00000636214 SLC18A2Q05940 514 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 GAB1Q13480 694 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 SPNS3Q6ZMD2 512 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 DDIASQ8IXT1 998 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 MEIOBQ8N635 442 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.19
PNKP-225ENST00000636214 INTS12Q96CB8 462 aaKnown RBP16.26■□□□□ 0.19
PNKP-225ENST00000636214 ZBED6CLQ96FA7 236 aaPredicted RBP16.26■□□□□ 0.19
PNKP-225ENST00000636214 APOPT1Q96IL0 206 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 TBL1XR1Q9BZK7 514 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 DSN1Q9H410 356 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 HHATLQ9HCP6 504 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 EQTNQ9NQ60 294 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
PNKP-225ENST00000636214 SH3BP4Q9P0V3 963 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
PNKP-225ENST00000636214 AKAP10O43572 662 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 RCBTB2O95199 551 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 IFI6P09912 130 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 PRPS2P11908 318 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 PEPDP12955 493 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 ASMTP46597 345 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 MANFP55145 182 aaKnown RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 EEFSECP57772 596 aaKnown RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 SORDQ00796 357 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 PCLAFQ15004 111 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 CEP70Q8NHQ1 597 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 GPR151Q8TDV0 419 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 NINJ1Q92982 152 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 TSSK3Q96PN8 268 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 YIPF4Q9BSR8 244 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 LMF2Q9BU23 707 aaKnown RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 RBM24Q9BX46 236 aaKnown RBP16.25■□□□□ 0.19
PNKP-225ENST00000636214 PIGMQ9H3S5 423 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 L2HGDHQ9H9P8 463 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 TNFRSF12AQ9NP84 129 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 RASSF1Q9NS23 344 aa16.25■□□□□ 0.19
PNKP-225ENST00000636214 NPIPB8E9PQR5 432 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 IL33O95760 270 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 LINC00032P0C843 101 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 ZNF708P17019 499 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 DNASE1P24855 282 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 MAPK1P28482 360 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 GABRA3P34903 492 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 PRKAG1P54619 331 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 GAS1P54826 345 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 TESK1Q15569 626 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 PRSS53Q2L4Q9 553 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 GALNTL6Q49A17 601 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 POMZP3Q6PJE2 187 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 ZNF551Q7Z340 670 aaPredicted RBP16.24■□□□□ 0.19
PNKP-225ENST00000636214 LUZP2Q86TE4 346 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 UBQLNLQ8IYU4 475 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 GCNT2Q8N0V5 402 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 NRGNQ92686 78 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 ZNF764Q96H86 408 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms