RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 OR52R1Q8NGF1 315 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 C12orf49Q9H741 205 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 ZBTB26Q9HCK0 441 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 GLRX2Q9NS18 164 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 MED11Q9P086 117 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 XPR1Q9UBH6 696 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 PRODH2Q9UF12 536 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 ATP1B1P05026 303 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 CT45A8P0DMV1 189 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 CT45A9P0DMV2 189 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 IL32P24001 234 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 EIF1AXP47813 144 aaKnown RBP16.13■□□□□ 0.17
CLN6-212ENST00000636020 IRF9Q00978 393 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 TRMT12Q53H54 448 aaKnown RBP16.13■□□□□ 0.17
CLN6-212ENST00000636020 CT45A2Q5DJT8 189 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 LARP4Q71RC2 724 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLN6-212ENST00000636020 NUDT13Q86X67 352 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 TMEM139Q8IV31 216 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 OR52B6Q8NGF0 335 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 MAGOHBQ96A72 148 aaKnown RBP16.13■□□□□ 0.17
CLN6-212ENST00000636020 BTBD9Q96Q07 612 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 BAG1Q99933 345 aaPredicted RBP16.13■□□□□ 0.17
CLN6-212ENST00000636020 CBLN4Q9NTU7 201 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 GUCA1BQ9UMX6 200 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 PCDHGA11Q9Y5H2 935 aa16.13■□□□□ 0.17
CLN6-212ENST00000636020 CSF3P09919 207 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 CD1DP15813 335 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 AGTR1P30556 359 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 TTKP33981 857 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 CR1LQ2VPA4 569 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 GLYR1Q49A26 553 aaPredicted RBP16.12■□□□□ 0.17
CLN6-212ENST00000636020 CFAP36Q96G28 342 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 PRR14Q9BWN1 585 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 DDX47Q9H0S4 455 aaKnown RBP16.12■□□□□ 0.17
CLN6-212ENST00000636020 CES1P1Q9UKY3 287 aa16.12■□□□□ 0.17
CLN6-212ENST00000636020 K7EPI3 171 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 EIF1AYO14602 144 aaKnown RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 SCO2O43819 266 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 TUBBP07437 444 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 IL12BP29460 328 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 FEN1P39748 380 aaKnown RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 COMPP49747 757 aaPredicted RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 ZNF75DP51815 510 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 PNLIPRP2P54317 469 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 GPX6P59796 221 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 DUSP2Q05923 314 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 TMEM44Q2T9K0 475 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 OR10D3Q8NH80 312 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 C1GALT1C1Q96EU7 318 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 USB1Q9BQ65 265 aaKnown RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 PTGES2Q9H7Z7 377 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 OPTCQ9UBM4 332 aa16.11■□□□□ 0.17
CLN6-212ENST00000636020 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 PRKDCP78527 4128 aaKnown RBP16.11■□□□□ 0.17
CLN6-212ENST00000636020 GOLGA6L10A6NI86 522 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 VWC2LB2RUY7 222 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 H7C417 338 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 S100BP04271 92 aaPredicted RBP16.1■□□□□ 0.17
CLN6-212ENST00000636020 CCDC166P0CW27 439 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 PCSK2P16519 638 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 EVI2BP34910 448 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 KRT20P35900 424 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 CORO7P57737 925 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 PHEXP78562 749 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 STEAP4Q687X5 459 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 TFAP2EQ6VUC0 442 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 CCDC25Q86WR0 208 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 MYLK4Q86YV6 388 aaPredicted RBP16.1■□□□□ 0.17
CLN6-212ENST00000636020 C3orf56Q8N813 242 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 KISS1RQ969F8 398 aaPredicted RBP16.1■□□□□ 0.17
CLN6-212ENST00000636020 ADGRG7Q96K78 797 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 POTEKPQ9BYX7 375 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 SAYSD1Q9NPB0 183 aa16.1■□□□□ 0.17
CLN6-212ENST00000636020 PAQR5Q9NXK6 330 aaPredicted RBP16.1■□□□□ 0.17
CLN6-212ENST00000636020 SERINC4A6NH21 518 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 E7EQL1 145 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 H0YIV9 168 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 FADS1O60427 444 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 NME6O75414 186 aaPredicted RBP16.09■□□□□ 0.17
CLN6-212ENST00000636020 NTN1O95631 604 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 TGFAP01135 160 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 CSNK2A2P19784 350 aaPredicted RBP16.09■□□□□ 0.17
CLN6-212ENST00000636020 CXCR5P32302 372 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 ATP6V0D1P61421 351 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 MRPS35P82673 323 aaKnown RBP16.09■□□□□ 0.17
CLN6-212ENST00000636020 GGTLC2Q14390 218 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 P2RY6Q15077 328 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 LTB4RQ15722 352 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 HP1BP3Q5SSJ5 553 aaPredicted RBP16.09■□□□□ 0.17
CLN6-212ENST00000636020 LIPJQ5W064 366 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 NPSR1Q6W5P4 371 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 GALNT10Q86SR1 603 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 ZFAND2BQ8WV99 257 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 EXT2Q93063 718 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 EFHD2Q96C19 240 aaPredicted RBP16.09■□□□□ 0.17
CLN6-212ENST00000636020 MCMBPQ9BTE3 642 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 RTN4RQ9BZR6 473 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 STOML1Q9UBI4 398 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms