RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 OR6C76A6NM76 312 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 EVPLLA8MZ36 301 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 NME4O00746 187 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MATN1P21941 496 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SLC6A2P23975 617 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CRATP43155 626 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 PRIM2P49643 509 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 RNF4P78317 190 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 Q0VFX4 171 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SELPLGQ14242 412 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ZNHIT3Q15649 155 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 COL28A1Q2UY09 1125 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DEFB109BQ30KR1 87 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MTX3Q5HYI7 312 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 RABL3Q5HYI8 236 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 NANOGP8Q6NSW7 305 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 HMBOX1Q6NT76 420 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MFSD12Q6NUT3 480 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 TNFAIP8L2Q6P589 184 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 C9orf40Q8IXQ3 194 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SLC15A3Q8IY34 581 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CLEC1AQ8NC01 280 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ELP5Q8TE02 316 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 THAP3Q8WTV1 239 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 LRTOMTQ8WZ04 291 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CNBD2Q96M20 576 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SH3GL1Q99961 368 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CPPED1Q9BRF8 314 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ITPAQ9BY32 194 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ACTRT3Q9BYD9 372 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ATP13A2Q9NQ11 1180 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 OLAHQ9NV23 265 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 PACSIN3Q9UKS6 424 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 C2orf92A0A1B0GVN3 265 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 DHRS12A0PJE2 317 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 PRKNO60260 465 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 ZFAND5O76080 213 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 PGM3O95394 542 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 SERPINA7P05543 415 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 ITGAMP11215 1152 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 CDH2P19022 906 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 RPS6KA3P51812 740 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 RRADP55042 308 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 AIMP2Q13155 320 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 MYBPC3Q14896 1274 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 EBPQ15125 230 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 NNATQ16517 81 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 COX20Q5RI15 118 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 ZBTB49Q6ZSB9 765 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 ERI1Q8IV48 349 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 RNF148Q8N7C7 305 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 CDRT4Q8N9R6 151 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 OR8J3Q8NGG0 315 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 THOC3Q96J01 351 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 VSTM2LQ96N03 204 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 WWTR1Q9GZV5 400 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 IKZF5Q9H5V7 419 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 LIN28AQ9H9Z2 209 aaKnown RBP13.38□□□□□ -0.27
LINC00339-208ENST00000634934 CORO2BQ9UQ03 480 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 CEPT1Q9Y6K0 416 aa13.38□□□□□ -0.27
LINC00339-208ENST00000634934 PCSK5Q92824 1860 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 A0A087WXM4 84 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 RASAL1O95294 804 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ALOX5P09917 674 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ETFAP13804 333 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 FASP25445 335 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ITGA3P26006 1051 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 HTR1EP28566 365 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 KHKP50053 298 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 CXADRP78310 365 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 RGNQ15493 299 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ATP6AP1Q15904 470 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ZCCHC12Q6PEW1 402 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 HORMAD2Q8N7B1 307 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 SLC16A11Q8NCK7 471 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 OR52E4Q8NGH9 312 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 OR52N2Q8NGI0 321 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 OR5L2Q8NGL0 311 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 GPR151Q8TDV0 419 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 ADAMTS15Q8TE58 950 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 RAB8BQ92930 207 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 OR51I1Q9H343 314 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
LINC00339-208ENST00000634934 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms