RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 AGAP6Q5VW22 663 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 RESP18Q5W5W9 173 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ARHGAP17Q68EM7 881 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SPOPLQ6IQ16 392 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF770Q6IQ21 691 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 C19orf48Q6RUI8 117 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SCARA5Q6ZMJ2 495 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 KCTD8Q6ZWB6 473 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ACOT1Q86TX2 421 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CCDC65Q8IXS2 484 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 EID3Q8N140 333 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 HDDC3Q8N4P3 179 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CCDC63Q8NA47 563 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 OR10Q1Q8NGQ4 319 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 OR2T3Q8NH03 318 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 RNASE8Q8TDE3 154 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SAP25Q8TEE9 199 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TAF4BQ92750 862 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TSACCQ96A04 125 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 BIRC7Q96CA5 298 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NXPE2Q96DL1 559 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 IL17FQ96PD4 163 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TSSK2Q96PF2 358 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 DUX5Q96PT3 197 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 RASL10BQ96S79 203 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PKP4Q99569 1192 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NDNQ99608 321 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF559Q9BR84 538 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 URM1Q9BTM9 101 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 GPR174Q9BXC1 333 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 BBS2Q9BXC9 721 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ACPTQ9BZG2 426 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 UBXN6Q9BZV1 441 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TSPYL1Q9H0U9 437 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 P2RY12Q9H244 342 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF106Q9H2Y7 1883 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 DDX31Q9H8H2 851 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 C10orf88Q9H8K7 445 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 EVA1AQ9H8M9 152 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ASCL3Q9NQ33 180 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PHPT1Q9NRX4 125 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 GPR173Q9NS66 373 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ELOVL2Q9NXB9 296 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 P4HTMQ9NXG6 502 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PTTG2Q9NZH5 202 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 FETUBQ9UGM5 382 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NOCTQ9UK39 431 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 STUB1Q9UNE7 303 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TRAF3IP3Q9Y228 551 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TDRKHQ9Y2W6 561 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 COQ4Q9Y3A0 265 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TEX264Q9Y6I9 313 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 DOPEY2Q9Y3R5 2298 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 MAP1AP78559 2803 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TRAV18A0A075B6X5 111 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 A0A087X0K7 114 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRBV2A0A0J9YWF9 115 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RNF103-CHMP3A0A140T963 221 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SYCE3A1L190 88 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 VPS37CA5D8V6 355 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRABD2BA6NFA1 517 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 YJEFN3A6XGL0 299 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 MEI4A8MW99 385 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 E7ENQ6 273 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 H0YIG0 161 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 H3BQV1 296 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 RNF103O00237 685 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PDXKO00764 312 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 XPO1O14980 1071 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 YKT6O15498 198 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SCO2O43819 266 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PRPSAP2O60256 369 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 PRKNO60260 465 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 DFNA5O60443 496 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 NR3C1P04150 777 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ABHD2P08910 425 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 FAM200BP0CF97 657 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM49P0CI25 452 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TRIM49CP0CI26 452 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 F3P13726 295 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HLA-EP13747 358 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 GNSP15586 552 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 TNNI1P19237 187 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ACP1P24666 158 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ELAVL4P26378 380 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 MAPK3P27361 379 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CALRP27797 417 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 OXTRP30559 389 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 SSTR1P30872 391 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CD70P32970 193 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ATP5C1P36542 298 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 FMO5P49326 533 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CSNK1EP49674 416 aaKnown RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 LUMP51884 338 aaPredicted RBP2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CASP9P55211 416 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CLDN6P56747 220 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 DAOAP59103 153 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 HERV-K104P61576 105 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 CETN1Q12798 172 aa2.2□□□□□ -2.06
SMARCB1-208ENST00000634926 ILKQ13418 452 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms