RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	PKNOX1	P55347	436 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	GFRA1	P56159	465 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	FOXD4	Q12950	439 aa	Predicted RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	GLE1	Q53GS7	698 aa	Known RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	UNC50	Q53HI1	259 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	CT45A2	Q5DJT8	189 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	RAET1L	Q5VY80	246 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	FAM219B	Q5XKK7	198 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	OR2A2	Q6IF42	318 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	SLC44A2	Q8IWA5	706 aa	Predicted RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	UBQLNL	Q8IYU4	475 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	CNEP1R1	Q8N9A8	125 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	C16orf78	Q8WTQ4	265 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	EFHD2	Q96C19	240 aa	Predicted RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	VSTM2L	Q96N03	204 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	DACH2	Q96NX9	599 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	STMN4	Q9H169	189 aa	Predicted RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	ANKRA2	Q9H9E1	313 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	FOLH1B	Q9HBA9	442 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	SLC35C2	Q9NQQ7	365 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	JKAMP	Q9P055	326 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	TMEM216	Q9P0N5	145 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	PPP4R1L	Q9P1A2	415 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	NDRG3	Q9UGV2	375 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	ZNF225	Q9UK10	706 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	FBXL2	Q9UKC9	423 aa		9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	EIF3L	Q9Y262	564 aa	Known RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	RPH3A	Q9Y2J0	694 aa	Predicted RBP	9.4	□□□□□ -0.9
UBE3A-223	ENST00000631247	MED12	Q93074	2177 aa		9.4	□□□□□ -0.91
UBE3A-223	ENST00000631247	NSD1	Q96L73	2696 aa	Predicted RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	GOLGA8R	I6L899	631 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	DLX3	O60479	287 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	TSPAN2	O60636	221 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	NME6	O75414	186 aa	Predicted RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	ATE1	O95260	518 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	ABHD2	P08910	425 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	SBK3	P0C264	359 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	IMPDH1	P20839	514 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	ECHS1	P30084	290 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	NTS	P30990	170 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	EVI2B	P34910	448 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	STAR	P49675	285 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	CLK3	P49761	638 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	HTR6	P50406	440 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	LHX2	P50458	406 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	NCBP2	P52298	156 aa	Known RBP eCLIP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	PNLIPRP2	P54317	469 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	PRKAA2	P54646	552 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	DSCR4	P56555	118 aa	Predicted RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	EEFSEC	P57772	596 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	RAE1	P78406	368 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	RELB	Q01201	579 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	ZNF763	Q0D2J5	394 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	C2orf80	Q0P641	193 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	STX5	Q13190	355 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	ZNHIT3	Q15649	155 aa	Predicted RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	DEFB113	Q30KQ7	82 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	PLXDC2	Q6UX71	529 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	TRMT10C	Q7L0Y3	403 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	CCNYL1	Q8N7R7	359 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	NTNG2	Q96CW9	530 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	CCDC126	Q96EE4	140 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	APIP	Q96GX9	242 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	NEUROD4	Q9HD90	331 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	MID1IP1	Q9NPA3	183 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	SDHAF3	Q9NRP4	125 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	DDX18	Q9NVP1	670 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	CLCF1	Q9UBD9	225 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	MRTO4	Q9UKD2	239 aa	Known RBP	9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247	TIMM22	Q9Y584	194 aa		9.39	□□□□□ -0.91
UBE3A-223	ENST00000631247		A0A1W2PNV4	684 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	SLC22A20	A6NK97	555 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	SEC14L5	O43304	696 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	PLOD3	O60568	738 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	SLITRK5	O94991	958 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	JUN	P05412	331 aa	Known RBP	9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	GSTA1	P08263	222 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	ZNF708	P17019	499 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	DDC	P20711	480 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	MC3R	P41968	323 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	RFX3	P48380	749 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	PSMD4	P55036	377 aa	Known RBP	9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	CLDN18	P56856	261 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	GANAB	Q14697	944 aa	Known RBP	9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	BCL2A1	Q16548	175 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	DECR1	Q16698	335 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	KRTAP21-3	Q3LHN1	58 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	CFAP157	Q5JU67	520 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	PPP4R4	Q6NUP7	873 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	GALNT18	Q6P9A2	607 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	TMEM107	Q6UX40	140 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	NPSR1	Q6W5P4	371 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	TIFAB	Q6ZNK6	161 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	IFT20	Q8IY31	132 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	CNPY4	Q8N129	248 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	TMEM151A	Q8N4L1	468 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	OR7G2	Q8NG99	324 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	NANOS1	Q8WY41	292 aa	Known RBP	9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	SMPDL3B	Q92485	455 aa		9.38	□□□□□ -0.91
UBE3A-223	ENST00000631247	L3HYPDH	Q96EM0	354 aa		9.38	□□□□□ -0.91

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