RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 MPIP34949 423 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 PSPHP78330 225 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 CKAP4Q07065 602 aaKnown RBP17.12■□□□□ 0.33
SMN2-215ENST00000628696 ACSM2AQ08AH3 577 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 HEPACAMQ14CZ8 416 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 UNC50Q53HI1 259 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 ACSM2BQ68CK6 577 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 GPRIN3Q6ZVF9 776 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 ZNF550Q7Z398 422 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 TMEM151AQ8N4L1 468 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 OR5M1Q8NGP8 315 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 CDC26Q8NHZ8 85 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 NUDT8Q8WV74 236 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 APIPQ96GX9 242 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 ZNF845Q96IR2 970 aaPredicted RBP17.12■□□□□ 0.33
SMN2-215ENST00000628696 Q96MF0 132 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 CCL19Q99731 98 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 PIP5K1AQ99755 562 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 PINK1Q9BXM7 581 aa17.12■□□□□ 0.33
SMN2-215ENST00000628696 NSD1Q96L73 2696 aaPredicted RBP17.12■□□□□ 0.33
SMN2-215ENST00000628696 FN1P02751 2386 aaKnown RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 H0YC42 278 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 PLOD3O60568 738 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 FPR1P21462 350 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 CRYGSP22914 178 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 UGT2B10P36537 528 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 KIR2DL2P43627 348 aaPredicted RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 SUCLG1P53597 346 aaKnown RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 TPD52P55327 224 aaPredicted RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 EEFSECP57772 596 aaKnown RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 ACKR1Q16570 336 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 SPIN4Q56A73 249 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 RELL1Q8IUW5 271 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 LRRC75A-AS1Q8N1F1 130 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 CIARTQ8N365 385 aaPredicted RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 OR2M3Q8NG83 312 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 RNF138Q8WVD3 245 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 ARSGQ96EG1 525 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 ZNF382Q96SR6 550 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 ACPTQ9BZG2 426 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 SDHAF3Q9NRP4 125 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 ELOVL5Q9NYP7 299 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 DMGDHQ9UI17 866 aaKnown RBP17.11■□□□□ 0.33
SMN2-215ENST00000628696 ZNF337Q9Y3M9 751 aa17.11■□□□□ 0.33
SMN2-215ENST00000628696 H3BML4 177 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 C16orf97H3BN30 126 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 TIA1P31483 386 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMN2-215ENST00000628696 HTR6P50406 440 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 CLDN15P56746 228 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 ZNF678Q5SXM1 525 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 ANKRD34AQ69YU3 496 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
SMN2-215ENST00000628696 FADS6Q8N9I5 356 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 PERPQ96FX8 193 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 BDH2Q9BUT1 245 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 STMN4Q9H169 189 aaPredicted RBP17.1■□□□□ 0.33
SMN2-215ENST00000628696 FLRT3Q9NZU0 649 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 ZNF180Q9UJW8 692 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 NFU1Q9UMS0 254 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 TIMM22Q9Y584 194 aa17.1■□□□□ 0.33
SMN2-215ENST00000628696 ROS1P08922 2347 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 EMC8O43402 210 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 DLX3O60479 287 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 COQ9O75208 318 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 TNFRSF21O75509 655 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 JUNP05412 331 aaKnown RBP17.09■□□□□ 0.33
SMN2-215ENST00000628696 SNRPAP09012 282 aaKnown RBP17.09■□□□□ 0.33
SMN2-215ENST00000628696 ANXA4P09525 319 aaPredicted RBP17.09■□□□□ 0.33
SMN2-215ENST00000628696 PCSK6P29122 969 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 RFX3P48380 749 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 PCYT1AP49585 367 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 NCBP2P52298 156 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMN2-215ENST00000628696 CLDN20P56880 219 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 PSG6Q00889 435 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 C2orf80Q0P641 193 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 SPDYAQ5MJ70 313 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 PPP4R4Q6NUP7 873 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 ZNF610Q8N9Z0 462 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 FNDC9Q8TBE3 224 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 DUSP19Q8WTR2 217 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 COX4I2Q96KJ9 171 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 FMO2Q99518 471 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 KLHL4Q9C0H6 718 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 TSPYL1Q9H0U9 437 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 PTGES2Q9H7Z7 377 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 TMEM216Q9P0N5 145 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 PROCRQ9UNN8 238 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 JMJD1CQ15652 2540 aa17.09■□□□□ 0.33
SMN2-215ENST00000628696 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 OR2M5A3KFT3 312 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 GMFGO60234 142 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 FADS1O60427 444 aa17.08■□□□□ 0.32
SMN2-215ENST00000628696 CLK3P49761 638 aaKnown RBP17.08■□□□□ 0.32
SMN2-215ENST00000628696 RPS3AP61247 264 aaKnown RBP17.08■□□□□ 0.32
SMN2-215ENST00000628696 GANABQ14697 944 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms