RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SORT1Q99523 831 aa11.35□□□□□ -0.59
LINC00963-217ENST00000624009 SPOCK3Q9BQ16 436 aa11.35□□□□□ -0.59
LINC00963-217ENST00000624009 TREX2Q9BQ50 279 aaPredicted RBP11.35□□□□□ -0.59
LINC00963-217ENST00000624009 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
LINC00963-217ENST00000624009 SPRR3Q9UBC9 169 aa11.35□□□□□ -0.59
LINC00963-217ENST00000624009 BAIAP2L1Q9UHR4 511 aa11.35□□□□□ -0.59
LINC00963-217ENST00000624009 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 EMC8O43402 210 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 AKAP10O43572 662 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 FADS1O60427 444 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 TRAPPC6AO75865 159 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 LRATO95237 230 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 KCNH1O95259 989 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 EVI2BP34910 448 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CLK3P49761 638 aaKnown RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 GAS1P54826 345 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CLDN8P56748 225 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 HSPB3Q12988 150 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 GAB1Q13480 694 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 PTGR1Q14914 329 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 LSM12Q3MHD2 195 aaKnown RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CPTPQ5TA50 214 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CES4AQ5XG92 561 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 RTL6Q6ICC9 239 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 ZNF585AQ6P3V2 769 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 C3P1Q6ZMU1 363 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 ULK2Q8IYT8 1036 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 ZNF781Q8N8C0 355 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 FAM83FQ8NEG4 500 aaPredicted RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 AGR3Q8TD06 166 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 GFM2Q969S9 779 aaKnown RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CIDECQ96AQ7 238 aaPredicted RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 GIMAP5Q96F15 307 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 STACQ99469 402 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 TIMP4Q99727 224 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 BHLHE41Q9C0J9 482 aaPredicted RBP11.34□□□□□ -0.59
LINC00963-217ENST00000624009 SLC6A15Q9H2J7 730 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 SDHAF3Q9NRP4 125 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 DUSP22Q9NRW4 184 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 THAP1Q9NVV9 213 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 RNF6Q9Y252 685 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 CSMD1Q96PZ7 3565 aa11.34□□□□□ -0.59
LINC00963-217ENST00000624009 IGLV3-32A0A0A0MS00 114 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 C15orf38-AP3S2A0A0A6YYH1 394 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 GNB5O14775 395 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ZNHIT1O43257 154 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ITM2AO43736 263 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 SKAP2O75563 359 aaPredicted RBP11.33□□□□□ -0.6
LINC00963-217ENST00000624009 EPPINO95925 133 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 KRT16P08779 473 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 GLI4P10075 376 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 CYP4B1P13584 511 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 CPN1P15169 458 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 IGFBP2P18065 325 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 COL8A1P27658 744 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 TIMP3P35625 211 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
LINC00963-217ENST00000624009 PRIM2P49643 509 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 DIO3P55073 304 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 NUP107P57740 925 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 PMPCAQ10713 525 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 STX3Q13277 289 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 SLC25A35Q3KQZ1 300 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 HHATQ5VTY9 493 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OGFOD2Q6N063 350 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 MFSD12Q6NUT3 480 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 BHLHB9Q6PI77 547 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ENPP6Q6UWR7 440 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 TRIM42Q8IWZ5 723 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 NUP43Q8NFH3 380 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OR4N2Q8NGD1 307 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OR8J2Q8NGG1 315 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OR5M9Q8NGP3 310 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 CLHC1Q8NHS4 586 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 FAM110BQ8TC76 370 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ZPLD1Q8TCW7 415 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 OR5P2Q8WZ92 322 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ABTB1Q969K4 478 aaPredicted RBP11.33□□□□□ -0.6
LINC00963-217ENST00000624009 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 EFHD2Q96C19 240 aaPredicted RBP11.33□□□□□ -0.6
LINC00963-217ENST00000624009 UCN2Q96RP3 112 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 ENKD1Q9H0I2 346 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 CALHM2Q9HA72 323 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 MEAF6Q9HAF1 191 aa11.33□□□□□ -0.6
LINC00963-217ENST00000624009 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms