RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TRAPPC6AO75865 159 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 TIMP1P01033 207 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
GABRB3-215ENST00000622697 RLN2P04090 185 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 AHRP35869 848 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 HYAL4Q2M3T9 481 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 RAB12Q6IQ22 244 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 ARHGAP11AQ6P4F7 1023 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 LSM14AQ8ND56 463 aaKnown RBP15.25■□□□□ 0.03
GABRB3-215ENST00000622697 TRMT10AQ8TBZ6 339 aaKnown RBP15.25■□□□□ 0.03
GABRB3-215ENST00000622697 ASB15Q8WXK1 588 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 HS6ST2Q96MM7 605 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
GABRB3-215ENST00000622697 CCNOP22674 350 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 GNG2P59768 71 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 HHEXQ03014 270 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 OR2G6Q5TZ20 316 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 TMEM17Q86X19 198 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 PARP16Q8N5Y8 322 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 SYT14Q8NB59 555 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 CREB3L1Q96BA8 519 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 HIST1H2AAQ96QV6 131 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 WDR77Q9BQA1 342 aaPredicted RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 GTPBP2Q9BX10 602 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 MGAT4CQ9UBM8 478 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 HEXBP07686 556 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 CHMP24386 653 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 CSNK1DP48730 415 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 MYEOVQ96EZ4 313 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 BCL7BQ9BQE9 202 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 EGLN3Q9H6Z9 239 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 URB1O60287 2271 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 GPR89AB7ZAQ6 455 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 SGK494L7N484 410 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 GATBO75879 557 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 KCNK5O95279 499 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 CYB5AP00167 134 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 GPR89BP0CG08 455 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 HTR2BP41595 481 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 ELOCQ15369 112 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 SYNPOQ8N3V7 929 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 TBC1D15Q8TC07 691 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 PPIL3Q9H2H8 161 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 LTB4R2Q9NPC1 389 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 CLEC4EQ9ULY5 219 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 RBM34P42696 430 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 TRAM1Q15629 374 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 RNF111Q6ZNA4 994 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 OR5J2Q8NH18 312 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 MS4A4EQ96PG1 132 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 TREM1Q9NP99 234 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 SLC2A4RGQ9NR83 387 aa15.24■□□□□ 0.03
GABRB3-215ENST00000622697 AK6Q9Y3D8 172 aaKnown RBP15.24■□□□□ 0.03
GABRB3-215ENST00000622697 LYRM1O43325 122 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 FOXB2Q5VYV0 432 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 TMEM225Q6GV28 225 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 B3GLCTQ6Y288 498 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 OLIG3Q7RTU3 272 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 SDR9C7Q8NEX9 313 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 MSANTD3Q96H12 275 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ZNF559Q9BR84 538 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 PDE7BQ9NP56 450 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 GPR34Q9UPC5 381 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 DHDHQ9UQ10 334 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ZNF208O43345 1280 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 VEGFBP49765 207 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 EXOSC7Q15024 291 aaKnown RBP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 OR4F15Q8NGB8 312 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 APOOQ9BUR5 198 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 GPN2Q9H9Y4 310 aaPredicted RBP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 CA5BQ9Y2D0 317 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 PRKRAO75569 313 aaKnown RBP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 PPM1BO75688 479 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 CYP17A1P05093 508 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 FBXO45P0C2W1 286 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 PVRP15151 417 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ADAMTS16Q8TE57 1224 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 SLC6A7Q99884 636 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ZFYVE21Q9BQ24 234 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 SOX9P48436 509 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 MGAT3Q09327 533 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 GLT8D1Q68CQ7 371 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 TMEFF1Q8IYR6 380 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 PINK1Q9BXM7 581 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 DNMT3BQ9UBC3 853 aaKnown RBP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 ABCD2Q9UBJ2 740 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 MLXQ9UH92 298 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 SCP2D1Q9UJQ7 156 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 MAB21L2Q9Y586 359 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 CLUP10909 449 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 CTXN1P60606 82 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 IRF4Q15306 451 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 BCDIN3DQ7Z5W3 292 aaKnown RBP15.23■□□□□ 0.03
GABRB3-215ENST00000622697 WBP2Q969T9 261 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 FKBP10Q96AY3 582 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 MEMO1Q9Y316 297 aa15.23■□□□□ 0.03
GABRB3-215ENST00000622697 HPGDSO60760 199 aa15.22■□□□□ 0.03
GABRB3-215ENST00000622697 H2BFMP0C1H6 154 aa15.22■□□□□ 0.03
GABRB3-215ENST00000622697 SBK3P0C264 359 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms