RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SPDYE7PQ495Y7 208 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 FAM74A1Q5RGS3 127 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 SHFQ7M4L6 423 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 OTOP2Q7RTS6 562 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 LUZP2Q86TE4 346 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 DNAJC22Q8N4W6 341 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 NANOGP1Q8N7R0 232 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 RASGEF1AQ8N9B8 481 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 ZNF527Q8NB42 609 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 OR10G2Q8NGC3 310 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 TMEM159Q96B96 161 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 MRPS24Q96EL2 167 aaKnown RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 ZBED6CLQ96FA7 236 aaPredicted RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 NKX6-2Q9C056 277 aaPredicted RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 EVA1AQ9H8M9 152 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 BRF2Q9HAW0 419 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 RAD18Q9NS91 495 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 SEC14L4Q9UDX3 406 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 LAMA2P24043 3122 aaKnown RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 TEX46H3BTG2 121 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 M0R129 80 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 ORC5O43913 435 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 STSP08842 583 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 ZNF8P17098 575 aaPredicted RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 SPI1P17947 270 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 PPIBP23284 216 aaKnown RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 VIPR1P32241 457 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 TGM4P49221 684 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CDH12P55289 794 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 MC1RQ01726 317 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 SPIBQ01892 262 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 ELP6Q0PNE2 266 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 IER5LQ5T953 404 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 HSD17B13Q7Z5P4 300 aaPredicted RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 EIF4E3Q8N5X7 224 aaKnown RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 OR11H7Q8NGC8 314 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CREB3L4Q8TEY5 395 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 SORCS1Q8WY21 1168 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 NEIL2Q969S2 332 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 SLC38A3Q99624 504 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 TMEM121BQ9BXQ6 578 aaPredicted RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 MTG2Q9H4K7 406 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 EMC7Q9NPA0 242 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 GPR83Q9NYM4 423 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 GPR160Q9UJ42 338 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 ACSL6Q9UKU0 697 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 DENND4AQ7Z401 1863 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 PRAMEF25A6NGN4 478 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 J3KTA2 159 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 SULT1C2O00338 296 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CLDN4O14493 209 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 TGM5O43548 720 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 AP2A2O94973 939 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 GADD45GO95257 159 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 C6orf47O95873 294 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 GP1BAP07359 652 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 HSD3B1P14060 373 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 TIMP2P16035 220 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 HSD3B2P26439 372 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.533e-10■■□□□ 11.7
LITAF-221ENST00000622633 RGS6P49758 472 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 VEGFCP49767 419 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 MVDP53602 400 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CRISP3P54108 245 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CRYZQ08257 329 aaKnown RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 TBCEQ15813 527 aaPredicted RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 EXOC3L2Q2M3D2 409 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 NUDT18Q6ZVK8 323 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 NFKBIDQ8NI38 313 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.72□□□□□ -0.536e-14■■■■■ 70.6
LITAF-221ENST00000622633 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 PEX11GQ96HA9 241 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 NIPSNAP1Q9BPW8 284 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
LITAF-221ENST00000622633 ZNF226Q9NYT6 803 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 SPG21Q9NZD8 308 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 CORO2BQ9UQ03 480 aa11.72□□□□□ -0.53
LITAF-221ENST00000622633 FAM240BA0A1B0GVZ2 78 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 QSOX1O00391 747 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 NPC1O15118 1278 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 LEFTY1O75610 366 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 CATP04040 527 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 CYP17A1P05093 508 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 RB1P06400 928 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 CTSAP10619 480 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 PTGFRP43088 359 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 DEFA5Q01523 94 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 MLLT1Q03111 559 aaPredicted RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 STX4Q12846 297 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 ZNF284Q2VY69 593 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SPIN4Q56A73 249 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 LCN1P1Q5VSP4 162 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 TMEM107Q6UX40 140 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 LGI4Q8N135 537 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms