RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ANXA3P12429 323 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 H2AFXP16104 143 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 PSMA2P25787 234 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 OTX2P32243 289 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 PRPHP41219 470 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 METAP1P53582 386 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 RPS6P62753 249 aaKnown RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 TPD52L1Q16890 204 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 CCDC57Q2TAC2 916 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 CNPY1Q3B7I2 92 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 SNAI3Q3KNW1 292 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 NHLRC3Q5JS37 347 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 TIPARPQ7Z3E1 657 aaKnown RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 TBC1D21Q8IYX1 336 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 TADA1Q96BN2 335 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 DHTKD1Q96HY7 919 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 AKR1E2Q96JD6 320 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 FEM1AQ9BSK4 669 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 CRACR2AQ9BSW2 395 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 TEX13BQ9BXU2 312 aa3.9□□□□□ -1.79
CPNE3-213ENST00000622183 DHX33Q9H6R0 707 aaKnown RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 BARX2Q9UMQ3 279 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-213ENST00000622183 PPIAL4CA0A0B4J2A2 164 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 TRABD2BA6NFA1 517 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 A8MUI8 341 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 ZNF487B1APH4 448 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 H0YCG3 227 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 CASKO14936 926 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 XPO1O14980 1071 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 PPIHO43447 177 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 DUX1O43812 170 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 JCHAINP01591 159 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 IGFBP1P08833 259 aaPredicted RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 PPIAL4GP0DN37 164 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 PRG2P13727 222 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 PVRP15151 417 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 BRCC3P46736 316 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 VEGFCP49767 419 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 CSRP3P50461 194 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 ARFIP1P53367 373 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 NUCB2P80303 420 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 PDK4Q16654 411 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 LEMD1Q68G75 181 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 SPEM1Q8N4L4 309 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 MAPK1IP1LQ8NDC0 245 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 OSTF1Q92882 214 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 SLC30A2Q9BRI3 323 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 NFKBIZQ9BYH8 718 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 TRIM6Q9C030 488 aaPredicted RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 POLR1EQ9GZS1 481 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 TMEM117Q9H0C3 514 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 FAM120CQ9NX05 1096 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 CHRNA9Q9UGM1 479 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 CYTH4Q9UIA0 394 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 SNX6Q9UNH7 406 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 NTNG1Q9Y2I2 539 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 MRPS7Q9Y2R9 242 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 DDX49Q9Y6V7 483 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
CPNE3-213ENST00000622183 TCF20Q9UGU0 1960 aaKnown RBP3.89□□□□□ -1.79
CPNE3-213ENST00000622183 ESYT2A0FGR8 921 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 GSAPA4D1B5 854 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ACOD1A6NK06 481 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 PPIAL4DF5H284 164 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 OPN1LWP04000 364 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 BCKDHAP12694 445 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 XRCC1P18887 633 aaPredicted RBP3.88□□□□□ -1.79
CPNE3-213ENST00000622183 HNMTP50135 292 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 CNTN2Q02246 1040 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ABRAXAS2Q15018 415 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 TATDN3Q17R31 274 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 SLX4IPQ5VYV7 408 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 STXBP4Q6ZWJ1 553 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 HSD11B1LQ7Z5J1 315 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ANKRD37Q7Z713 158 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 PARGQ86W56 976 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ERICH1Q86X53 443 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 FGFRL1Q8N441 504 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 FBXO30Q8TB52 745 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 NANPQ8TBE9 248 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 TBCKQ8TEA7 893 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ITLN1Q8WWA0 313 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 RASL10AQ92737 203 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 PIWIL1Q96J94 861 aaKnown RBP3.88□□□□□ -1.79
CPNE3-213ENST00000622183 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 ZBP1Q9H171 429 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 UTP6Q9NYH9 597 aaKnown RBP3.88□□□□□ -1.79
CPNE3-213ENST00000622183 SENP1Q9P0U3 644 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 STYXL1Q9Y6J8 313 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 METP08581 1390 aa3.88□□□□□ -1.79
CPNE3-213ENST00000622183 FER1L5A0AVI2 2057 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 ZSCAN5CA6NGD5 496 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-213ENST00000622183 GPR89AB7ZAQ6 455 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 GMFGO60234 142 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 GALR3O60755 368 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-213ENST00000622183 SH3BGRLO75368 114 aa3.87□□□□□ -1.79
CPNE3-213ENST00000622183 STX11O75558 287 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms