RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 ARMC8Q8IUR7 673 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 ZDHHC21Q8IVQ6 265 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 C9orf40Q8IXQ3 194 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 OR7G1Q8NGA0 311 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 SPPL2AQ8TCT8 520 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 DAZLQ92904 295 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 CNBD2Q96M20 576 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 WDR77Q9BQA1 342 aaPredicted RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 NRSN2Q9GZP1 204 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 MAGIXQ9H6Y5 334 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 PCDHGA3Q9Y5H0 932 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 COMMD3-BMI1R4GMX3 469 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 A0A0G2JPF8 293 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 HNRNPCL2B2RXH8 293 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 HNRNPCL3B7ZW38 293 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 DYRK3O43781 588 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 AGR2O95994 175 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 HNRNPCL4P0DMR1 293 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 PPP1R8Q12972 351 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNHIT3Q15649 155 aaPredicted RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 GPR68Q15743 365 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 C6orf52Q5T4I8 152 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 TMEM205Q6UW68 189 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 VRK2Q86Y07 508 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 CHDHQ8NE62 594 aaPredicted RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 C7orf34Q96L11 122 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNF607Q96SK3 696 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 BTBD2Q9BX70 525 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ANKRD60Q9BZ19 345 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 PAPOLBQ9NRJ5 636 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 SEC14L3Q9UDX4 400 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 PADI1Q9ULC6 663 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 SH3GLB1Q9Y371 365 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 WDR45Q9Y484 360 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 DSPPQ9NZW4 1301 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 C7orf72A4D263 438 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 SAC3D1A6NKF1 404 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 KCNK2O95069 426 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 EPPINO95925 133 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 CALRP27797 417 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 HPCAP84074 193 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 MYBPC1Q00872 1141 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ATP6AP1Q15904 470 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 PAPD4Q6PIY7 484 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 CPEB2Q7Z5Q1 589 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ALDH16A1Q8IZ83 802 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 NFAM1Q8NET5 270 aaPredicted RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 OR1N1Q8NGS0 311 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 GAL3ST4Q96RP7 486 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 LIN28AQ9H9Z2 209 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 PNPLA3Q9NST1 481 aa17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNF223Q9UK11 482 aaPredicted RBP17.23■□□□□ 0.35
SEMA6C-210ENST00000621728 SAGE2PA6NJ88 616 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 PDE9AO76083 593 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 IFNA14P01570 189 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 CEACAM1P13688 526 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 TCN2P20062 427 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 MAGEA2P43356 314 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 GPR143P51810 404 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 IST1P53990 364 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 ROR2Q01974 943 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 APOFQ13790 326 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 GNA13Q14344 377 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 PUM1Q14671 1186 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 IQCCQ4KMZ1 466 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 BORAQ6PGQ7 559 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 KRT73Q86Y46 540 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 OR4D11Q8NGI4 311 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 DGCR14Q96DF8 476 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNF350Q9GZX5 532 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 NXF5Q9H1B4 397 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 NTN4Q9HB63 628 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 VCX3AQ9NNX9 186 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 IL1RAPQ9NPH3 570 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 VNN3Q9NY84 501 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 PRODH2Q9UF12 536 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 KCNE5Q9UJ90 142 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 NXT1Q9UKK6 140 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNF451Q9Y4E5 1061 aa17.22■□□□□ 0.35
SEMA6C-210ENST00000621728 CDC14CA4D256 554 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 CLDN24A6NM45 220 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 PEX12O00623 359 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 CLOCKO15516 846 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 BRINP1O60477 761 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 CST1P01037 141 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 LDLRP01130 860 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 ALPPP05187 535 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 CCNYL3P0C7X3 344 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 ETS2P15036 469 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 YAP1P46937 504 aaKnown RBP17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 KCNJ5P48544 419 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 NR1H2P55055 460 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 EBPQ15125 230 aaKnown RBP17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 MAPK14Q16539 360 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 CNPY1Q3B7I2 92 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 IFI44LQ53G44 452 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 TMEM164Q5U3C3 297 aa17.21■□□□□ 0.35
SEMA6C-210ENST00000621728 RBM45Q8IUH3 476 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms