RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RPE65Q16518 533 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MEP1AQ16819 746 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ESCO2Q56NI9 601 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC2A12Q8TD20 617 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TOR3AQ9H497 397 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PAK1IP1Q9NWT1 392 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ST14Q9Y5Y6 855 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 A0A1B0GVC2 190 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 C13orf42A0A1B0GVH6 325 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PLOD2O00469 737 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 UGDHO60701 494 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 WDPCPO95876 746 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PTHP01270 115 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PSKH1P11801 424 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PTGS2P35354 604 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 IRS1P35568 1242 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 FRKP42685 505 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SSR4P51571 173 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 AFF1P51825 1210 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 GALNT1Q10472 559 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CEACAM7Q14002 265 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 RBM39Q14498 530 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 HSD17B12Q53GQ0 312 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 EIF5AL1Q6IS14 154 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 NANOGP8Q6NSW7 305 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR52B6Q8NGF0 335 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR9A2Q8NGT5 310 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ITPKCQ96DU7 683 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC6A18Q96N87 628 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ADOQ96SZ5 270 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CNN2Q99439 309 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM168Q9H0V1 697 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CHRDQ9H2X0 955 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 NANOGQ9H9S0 305 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 FGF21Q9NSA1 209 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CCM2LQ9NUG4 571 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TAS2R10Q9NYW0 307 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 NOP16Q9Y3C1 178 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ANTXRLA6NF34 631 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF850A8MQ14 1090 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SNNO75324 88 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC35E2BP0CK96 405 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM225BP0DP42 221 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CRABP1P29762 137 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 GRPRP30550 384 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CPOXP36551 454 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 DCAF7P61962 342 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ACTA2P62736 377 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ACTG2P63267 376 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PSPHP78330 225 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 RANBP10Q6VN20 620 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR52E2Q8NGJ4 325 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR5L1Q8NGL2 311 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM19Q96HH6 336 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PBX4Q9BYU1 374 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 C5AR2Q9P296 337 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MRPS2Q9Y399 296 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 KLRC4-KLRK1H3BQV0 150 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 LDB3O75112 727 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MRPL33O75394 65 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ATG12O94817 140 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 RASAL1O95294 804 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SRFP11831 508 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MTHFD2P13995 350 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 PRKACGP22612 351 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ACVR1BP36896 505 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MC3RP41968 323 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 HK3P52790 923 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 LAPTM4AQ15012 233 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR7A5Q15622 319 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ATP6AP1Q15904 470 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CDKL4Q5MAI5 379 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SHFQ7M4L6 423 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 C19orf47Q8N9M1 422 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 ZFPM2Q8WW38 1151 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 NRG4Q8WWG1 115 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MED11Q9P086 117 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 OR6C70A6NIJ9 312 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 TSPAN4O14817 238 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 GALR3O60755 368 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 HEXAP06865 529 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PRSS56P0CW18 603 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 RHCEP18577 417 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 SDHBP21912 280 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 KDELR2P33947 212 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 CTSCP53634 463 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 PRPS1P60891 318 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR4D1Q15615 310 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 ARSKQ6UWY0 536 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR8H3Q8N146 312 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR7G3Q8NG95 312 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 OR14A16Q8NHC5 309 aa9.24□□□□□ -0.93
CLTCL1-211ENST00000621271 WDR20Q8TBZ3 569 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms