RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 OTUB1Q96FW1 271 aaPredicted RBP16.74■□□□□ 0.27
LITAF-220ENST00000620789 CHMP6Q96FZ7 201 aa16.74■□□□□ 0.27
LITAF-220ENST00000620789 TMEM41AQ96HV5 264 aa16.74■□□□□ 0.27
LITAF-220ENST00000620789 JSRP1Q96MG2 331 aaPredicted RBP16.74■□□□□ 0.27
LITAF-220ENST00000620789 PANX1Q96RD7 426 aa16.74■□□□□ 0.27
LITAF-220ENST00000620789 PIGUQ9H490 435 aa16.74■□□□□ 0.27
LITAF-220ENST00000620789 ZNF703Q9H7S9 590 aaPredicted RBP16.74■□□□□ 0.27
LITAF-220ENST00000620789 ZDHHC11Q9H8X9 412 aa16.74■□□□□ 0.27
LITAF-220ENST00000620789 NUP214P35658 2090 aaPredicted RBP16.74■□□□□ 0.27
LITAF-220ENST00000620789 ICOSLGO75144 302 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 IGKV1D-16P01601 117 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 MAGEA5P43359 124 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 RFX3P48380 749 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 MASP1P48740 699 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 MAN2A2P49641 1150 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 TIGD2Q4W5G0 525 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 FNDC7Q5VTL7 733 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 MSANTD1Q6ZTZ1 278 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 GHDCQ8N2G8 530 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 FAM109AQ8N4B1 249 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 PRR7Q8TB68 274 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 FAM110BQ8TC76 370 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 ADAMTS15Q8TE58 950 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 SLC35G5Q96KT7 338 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 GALNT9Q9HCQ5 603 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 B4GALT7Q9UBV7 327 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 TRIM33Q9UPN9 1127 aa16.73■□□□□ 0.27
LITAF-220ENST00000620789 CDC40O60508 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
LITAF-220ENST00000620789 SOX30O94993 753 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 KCNK2O95069 426 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 RFPL3SP0C7P2 107 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 CDKN2CP42773 168 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 RPS26P62854 115 aaKnown RBP16.72■□□□□ 0.27
LITAF-220ENST00000620789 POU6F2P78424 691 aaPredicted RBP16.72■□□□□ 0.27
LITAF-220ENST00000620789 HSF1Q00613 529 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 RBPJQ06330 500 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 RCAN2Q14206 197 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 SQLEQ14534 574 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.72■□□□□ 0.27
LITAF-220ENST00000620789 SAXO2Q658L1 398 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 CGB2Q6NT52 195 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 TRIML2Q8N7C3 387 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 CDS1Q92903 461 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 OR7D2Q96RA2 312 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 SLC35A5Q9BS91 424 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 INPP5KQ9BT40 448 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 BTBD2Q9BX70 525 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 TMEM120AQ9BXJ8 343 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 DEFB127Q9H1M4 99 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 SERHL2Q9H4I8 314 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 RMND5AQ9H871 391 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 SERHLQ9NQF3 203 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 TMEM45AQ9NWC5 275 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 ABCG2Q9UNQ0 655 aa16.72■□□□□ 0.27
LITAF-220ENST00000620789 C2orf72A6NCS6 295 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 CCDC154A6NI56 674 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 RFXANKO14593 260 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 GNB5O14775 395 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 FADS1O60427 444 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 NCF2P19878 526 aaPredicted RBP16.71■□□□□ 0.27
LITAF-220ENST00000620789 MATN1P21941 496 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
LITAF-220ENST00000620789 EVI2BP34910 448 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 ESPL1Q14674 2120 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 TIGD3Q6B0B8 471 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 FIGNL1Q6PIW4 674 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 ANGPTL8Q6UXH0 198 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 FUNDC1Q8IVP5 155 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 OR5D16Q8NGK9 328 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 MIPOL1Q8TD10 442 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 VPS33AQ96AX1 596 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 NEURL3Q96EH8 262 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 ZNF317Q96PQ6 595 aaPredicted RBP16.71■□□□□ 0.27
LITAF-220ENST00000620789 G6PC3Q9BUM1 346 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 QPCTLQ9NXS2 382 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 FLRT3Q9NZU0 649 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 CCDC167Q9P0B6 97 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 C15orf41Q9Y2V0 281 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 PCDHGB3Q9Y5G1 929 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 WIF1Q9Y5W5 379 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 KCNE3Q9Y6H6 103 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 NINQ8N4C6 2090 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 POLEQ07864 2286 aa16.71■□□□□ 0.27
LITAF-220ENST00000620789 DUXAA6NLW8 204 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 SNPHO15079 494 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 PDE9AO76083 593 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 UTS2O95399 124 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 IGHG3P01860 377 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 CELA3AP09093 270 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 LCN1P31025 176 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 CHI3L1P36222 383 aaPredicted RBP16.7■□□□□ 0.26
LITAF-220ENST00000620789 GAS1P54826 345 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 SLC10A1Q14973 349 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 DCST2Q5T1A1 773 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 CCNJQ5T5M9 372 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 METTL21CQ5VZV1 264 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 BLOC1S3Q6QNY0 202 aa16.7■□□□□ 0.26
LITAF-220ENST00000620789 ZNF621Q6ZSS3 439 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms