RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 TAF4O00268 1085 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 HMGN2P05204 90 aaKnown RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 FHP07954 510 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 GIMD1P0DJR0 217 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 PORP16435 677 aaPredicted RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 XKP51811 444 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 FOXD4Q12950 439 aaPredicted RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 PRTGQ2VWP7 1150 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 NKAIN2Q5VXU1 208 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 MEDAGQ5VYS4 303 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 WDR5BQ86VZ2 330 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 LRRC25Q8N386 305 aaPredicted RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 LINC00471Q8N535 108 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 OR4K14Q8NGD5 310 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 MOAP1Q96BY2 351 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 POLR2J3Q9H1A7 115 aaKnown RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 ANKRA2Q9H9E1 313 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 A4GNTQ9UNA3 340 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 SLC9A8Q9Y2E8 581 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 SPTBP11277 2137 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 MUC3AQ02505 3323 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 PPM1FP49593 454 aaPredicted RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 EPHA4P54764 986 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 LASP1Q14847 261 aaKnown RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 SHBQ15464 509 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 CA13Q8N1Q1 262 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 TMEM52Q8NDY8 209 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 OR56A1Q8NGH5 318 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 SLC7A13Q8TCU3 470 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 KAT2AQ92830 837 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 OTUB1Q96FW1 271 aaPredicted RBP23.68■■□□□ 1.38
VEGFC-202ENST00000618562 OR51E2Q9H255 320 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 CSNK1G3Q9Y6M4 447 aa23.68■■□□□ 1.38
VEGFC-202ENST00000618562 ARID1BQ8NFD5 2236 aaPredicted RBP23.67■■□□□ 1.38
VEGFC-202ENST00000618562 BOLA2-SMG1P6H3BVE0 249 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 SGK494L7N484 410 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 CYR61O00622 381 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 EMC8O43402 210 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 GABRA4P48169 554 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 ALDH6A1Q02252 535 aaKnown RBP23.67■■□□□ 1.38
VEGFC-202ENST00000618562 SIGLEC14Q08ET2 396 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 PMS2CLQ68D20 193 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 LACC1Q8IV20 430 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 MGLLQ99685 303 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 YIPF4Q9BSR8 244 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 PI4KAP42356 2102 aa23.67■■□□□ 1.38
VEGFC-202ENST00000618562 IGHV5-51A0A0C4DH38 117 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 LOC100506127A0A0U1RQW1 187 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 TLCD2A6NGC4 264 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 SRPX2O60687 465 aaPredicted RBP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 ENTPD6O75354 484 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 TGM1P22735 817 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 PRR5P85299 388 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 SHC2P98077 582 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 NDUFA9Q16795 377 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 CASP12Q6UXS9 341 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 CD300LDQ6UXZ3 194 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 USP53Q70EK8 1073 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 SLC35F3Q8IY50 421 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 SAMD14Q8IZD0 417 aaPredicted RBP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 OR8J1Q8NGP2 316 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 RAB33BQ9H082 229 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 TAS2R16Q9NYV7 291 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 DSCR3O14972 297 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 MED26O95402 600 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 HSMCR30P0CW71 290 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 DBTP11182 482 aaKnown RBP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 COX10Q12887 443 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 MED22Q15528 200 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 PRAMEF8Q5VWM4 474 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 PRAMEF7Q5VXH5 474 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 OR9A4Q8NGU2 314 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 WDR36Q8NI36 951 aaKnown RBP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 C16orf58Q96GQ5 468 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 OR5M11Q96RB7 305 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 IL4I1Q96RQ9 567 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 ELF4Q99607 663 aaPredicted RBP23.66■■□□□ 1.38
VEGFC-202ENST00000618562 WFDC6Q9BQY6 131 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 RACGAP1Q9H0H5 632 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 C3orf14Q9HBI5 128 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 EPHA6Q9UF33 1036 aa23.66■■□□□ 1.38
VEGFC-202ENST00000618562 TECTAO75443 2155 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 AGAP5A6NIR3 686 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 SAGE2PA6NJ88 616 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 H3BN98 237 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 CCRL2O00421 344 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 RDH16O75452 317 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 SOX14O95416 240 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 ADRA2AP08913 450 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 RHAGQ02094 409 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 TARDBPQ13148 414 aaKnown RBP eCLIP23.65■■□□□ 1.38
VEGFC-202ENST00000618562 PLEKHG7Q6ZR37 379 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 NUP43Q8NFH3 380 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 COL26A1Q96A83 441 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 NEURL2Q9BR09 285 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 CDADC1Q9BWV3 514 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 SPACA6W5XKT8 324 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 ASXL3Q9C0F0 2248 aa23.65■■□□□ 1.38
VEGFC-202ENST00000618562 CASC3O15234 703 aaKnown RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms