RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CBLCQ9ULV8 474 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 HRH3Q9Y5N1 445 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 WIF1Q9Y5W5 379 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 C15orf38-AP3S2A0A0A6YYH1 394 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 A0A1W2PRB8 838 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 FIGNL2A6NMB9 653 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 C19orf84I3L1E1 186 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 CYP4B1P13584 511 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 PTPN6P29350 595 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 PTGER4P35408 488 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 PNLIPRP2P54317 469 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 DIO3P55073 304 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 MRPS22P82650 360 aaKnown RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 DECR1Q16698 335 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 ZNF630Q2M218 657 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 SMU1Q2TAY7 513 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 CYP27C1Q4G0S4 372 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 WLSQ5T9L3 541 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 ATG16L1Q676U5 607 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 ZNF585AQ6P3V2 769 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 RPRMLQ8N4K4 120 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 MARVELD2Q8N4S9 558 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 NEIL3Q8TAT5 605 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 NTNG2Q96CW9 530 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 RMND5BQ96G75 393 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 PRPF18Q99633 342 aaKnown RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 MEAF6Q9HAF1 191 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 C3orf14Q9HBI5 128 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 ACKR4Q9NPB9 350 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 SERHLQ9NQF3 203 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 SIRT3Q9NTG7 399 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 ZCCHC3Q9NUD5 404 aaKnown RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 THAP1Q9NVV9 213 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 KLF2Q9Y5W3 355 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-228ENST00000618469 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
BRCA1-228ENST00000618469 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GXYLT2A0PJZ3 443 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 EMC8O43402 210 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 SCO2O43819 266 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 SNNO75324 88 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-228ENST00000618469 C6orf47O95873 294 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 HPNP05981 417 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 ACP2P11117 423 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GABRA3P34903 492 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 EVI2BP34910 448 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 PRR5P85299 388 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GAB1Q13480 694 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 MLC1Q15049 377 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 CDSNQ15517 529 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 VPS26BQ4G0F5 336 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GXYLT1Q4G148 440 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 MFSD12Q6NUT3 480 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 TRIM42Q8IWZ5 723 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 RIMKLAQ8IXN7 391 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 CDRT4Q8N9R6 151 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 RAB3IL1Q8TBN0 382 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GPR151Q8TDV0 419 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 PIK3R3Q92569 461 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 SLC9A6Q92581 669 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 JADE3Q92613 823 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 FAM120BQ96EK7 910 aaKnown RBP14.58□□□□□ -0.08
BRCA1-228ENST00000618469 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 OTUB1Q96FW1 271 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-228ENST00000618469 POM121Q96HA1 1249 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 DUSP26Q9BV47 211 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 BHLHE41Q9C0J9 482 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-228ENST00000618469 FLRT3Q9NZU0 649 aa14.58□□□□□ -0.08
BRCA1-228ENST00000618469 MRTO4Q9UKD2 239 aaKnown RBP14.58□□□□□ -0.08
BRCA1-228ENST00000618469 MTORP42345 2549 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 SDHDO14521 159 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 KCNH1O95259 989 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 IL33O95760 270 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 KITP10721 976 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 LBPP18428 481 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 ACVR2AP27037 513 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 SOAT1P35610 550 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 PSMD4P55036 377 aaKnown RBP14.57□□□□□ -0.08
BRCA1-228ENST00000618469 CLDN8P56748 225 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 C21orf58P58505 322 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 STX5Q13190 355 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 TP53BP2Q13625 1128 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 TESK1Q15569 626 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 PGS1Q32NB8 556 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 SPDYE7PQ495Y7 208 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 EIPR1Q53HC9 387 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 TTMPQ5BVD1 217 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 WIPI1Q5MNZ9 446 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-228ENST00000618469 XKRXQ6PP77 449 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 GALNT10Q86SR1 603 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 NATD1Q8N6N6 113 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 FAM83FQ8NEG4 500 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-228ENST00000618469 RNF138Q8WVD3 245 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 OR5P2Q8WZ92 322 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 COQ8BQ96D53 544 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 CHMP6Q96FZ7 201 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 ATP6V1G3Q96LB4 118 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 YIPF4Q9BSR8 244 aa14.57□□□□□ -0.08
BRCA1-228ENST00000618469 DPY30Q9C005 99 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms