RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ILKQ13418 452 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 LARS2Q15031 903 aaKnown RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 TCTE1Q5JU00 501 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 SNAP47Q5SQN1 464 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 GARNL3Q5VVW2 1013 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZCCHC12Q6PEW1 402 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 MEX3DQ86XN8 651 aaKnown RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 GALNT12Q8IXK2 581 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF619Q8N2I2 560 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 IPCEF1Q8WWN9 437 aaPredicted RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 CD180Q99467 661 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 GPA33Q99795 319 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 DCUN1D5Q9BTE7 237 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 TMEM9Q9P0T7 183 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 WARS2Q9UGM6 360 aaKnown RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 PSORS1C1Q9UIG5 152 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF232Q9UNY5 417 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 SATB2Q9UPW6 733 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 MRPS33Q9Y291 106 aaKnown RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 HEMK1Q9Y5R4 338 aaPredicted RBP16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 MYO15AQ9UKN7 3530 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF99A8MXY4 864 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 H3BN98 237 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 HRKO00198 91 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 NUDT21O43809 227 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 CTNSO60931 367 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 CYP7B1O75881 506 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 IFI6P09912 130 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 CSNK2BP67870 215 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 BNC1Q01954 994 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ROR2Q01974 943 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ENTPD8Q5MY95 495 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZC3H14Q6PJT7 736 aaKnown RBP16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 PRSS48Q7RTY5 328 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNF595Q8IYB9 648 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 ALOXE3Q9BYJ1 711 aa16.14■□□□□ 0.17
PCDHGC3-205ENST00000617641 A0A087WUU8 490 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 PEX12O00623 359 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 TP53P04637 393 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 MAOAP21397 527 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 DHPSP49366 369 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SH3BGRP55822 239 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 EEF1A1P68104 462 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 POU6F2P78424 691 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SHBQ15464 509 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 NIPAL1Q6NVV3 410 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 PLEKHM3Q6ZWE6 761 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 RIT1Q92963 219 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 RBM18Q96H35 190 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SIGLEC11Q96RL6 698 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 MCHR1Q99705 422 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 COPS4Q9BT78 406 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 CHRNA10Q9GZZ6 450 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 PLCXD1Q9NUJ7 323 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SELENONQ9NZV5 590 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 KCNE5Q9UJ90 142 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 CLDN16Q9Y5I7 305 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 MAU2Q9Y6X3 613 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 FITM1A5D6W6 292 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 AP3D1O14617 1153 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 KIAA0513O60268 411 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 NOL3O60936 208 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 TNNI3P19429 210 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 RPS4Y1P22090 263 aaKnown RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SSTR4P31391 388 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 PTCHD4Q6ZW05 846 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 LSRQ86X29 649 aaPredicted RBP16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR51Q1Q8NH59 317 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 RORBQ92753 470 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 GGHQ92820 318 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SLC38A4Q969I6 547 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 SAP130Q9H0E3 1048 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 ERVMER34-1Q9H9K5 563 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 CSNK1G3Q9Y6M4 447 aa16.13■□□□□ 0.17
PCDHGC3-205ENST00000617641 CLDN4O14493 209 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 COQ9O75208 318 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 THBS1P07996 1170 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 GLB1P16278 677 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 CD1CP29017 333 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 CSF2RBP32927 897 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 TMBIM6P55061 237 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 IGLV3-21P80748 117 aaPredicted RBP16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 GRM7Q14831 915 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 TRAM2Q15035 370 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 LYSMD4Q5XG99 296 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 C1orf94Q6P1W5 598 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 SVOPQ8N4V2 548 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 LINC00471Q8N535 108 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 ADAMTS18Q8TE60 1221 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 FUNDC2Q9BWH2 189 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 ACOT13Q9NPJ3 140 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 GPR83Q9NYM4 423 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 ASXL3Q9C0F0 2248 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 A0A1W2PPW3 197 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 CLCA1A8K7I4 914 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 TMEM150CB9EJG8 249 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 DUX1O43812 170 aa16.12■□□□□ 0.17
PCDHGC3-205ENST00000617641 NKX2-2O95096 273 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms