RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PRSS42Q7Z5A4 293 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 HSD11B1LQ7Z5J1 315 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 DNAJB7Q7Z6W7 309 aaPredicted RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 SIAH3Q8IW03 269 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 MS4A15Q8N5U1 240 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 SRFBP1Q8NEF9 429 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 OR8K5Q8NH50 307 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 SOCS4Q8WXH5 440 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 IFT22Q9H7X7 185 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 FOLH1BQ9HBA9 442 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 ZCCHC3Q9NUD5 404 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 A0A1W2PPL8 197 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 H0YC42 278 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 RB1P06400 928 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 HSD3B1P14060 373 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 PAICSP22234 425 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 HMGA2P52926 109 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 TRIM71Q2Q1W2 868 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 PRICKLE2Q7Z3G6 844 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 OR8D4Q8NGM9 314 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 SLC38A2Q96QD8 506 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 HHIPQ96QV1 700 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 ELF5Q9UKW6 265 aaPredicted RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 COPS3Q9UNS2 423 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
MSH6-214ENST00000616033 HELZP42694 1942 aaKnown RBP12.38□□□□□ -0.43
MSH6-214ENST00000616033 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 GFYI3L273 518 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 PIP5K1CO60331 668 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ATG13O75143 517 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SRPRAP08240 638 aaKnown RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 PRPH2P23942 346 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SPINT3P49223 89 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TEKQ02763 1124 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ST3GAL2Q16842 350 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SFRP5Q5T4F7 317 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZNF613Q6PF04 617 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SLC36A4Q6YBV0 504 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 RBPMSQ93062 196 aaKnown RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 CREB3L1Q96BA8 519 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZG16BQ96DA0 208 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 GIMAP5Q96F15 307 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 WDR89Q96FK6 387 aaPredicted RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 SCRN2Q96FV2 425 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZNF607Q96SK3 696 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 HPXP02790 462 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ACP2P11117 423 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CBR1P16152 277 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TBXA2RP21731 343 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 RFX3P48380 749 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SELENOPP49908 381 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 HSF2Q03933 536 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 MFSD13AQ14CX5 517 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TUSC1Q2TAM9 212 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TRMT10AQ8TBZ6 339 aaKnown RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 FAIM2Q9BWQ8 316 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 J3QLW9 94 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 PRODHO43272 600 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 PPM1BO75688 479 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 GYPBP06028 91 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZNF19P17023 458 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ACSL1P33121 698 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 HAAOP46952 286 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CENPAP49450 140 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 EEF1A2Q05639 463 aaKnown RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 PLBD1Q6P4A8 553 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CEACAM19Q7Z692 300 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 FAM181AQ8N9Y4 354 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 ZNF671Q8TAW3 534 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 CXorf58Q96LI9 332 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 RBP7Q96R05 134 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TMEM38AQ9H6F2 299 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 TNFRSF10DQ9UBN6 386 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 MAB21L2Q9Y586 359 aa12.37□□□□□ -0.43
MSH6-214ENST00000616033 SIRT4Q9Y6E7 314 aaPredicted RBP12.37□□□□□ -0.43
MSH6-214ENST00000616033 TEX51A0A1B0GUA7 166 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 H0YIV9 168 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 SCAMP1O15126 338 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ZNF806P0C7X5 589 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 ACADMP11310 421 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 CYBAP13498 195 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 TPMTP51580 245 aa12.36□□□□□ -0.43
MSH6-214ENST00000616033 PCBP3P57721 371 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms