RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GIPRP48546 466 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 SEC61A1P61619 476 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 RPS26P62854 115 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 SP140Q13342 867 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 CDC73Q6P1J9 531 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 HMGN2P46Q86SG4 172 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 OAFQ86UD1 273 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 KLHL36Q8N4N3 616 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 SPRYD4Q8WW59 207 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 WNT2BQ93097 391 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 INTS12Q96CB8 462 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 CHFRQ96EP1 664 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 WBP1Q96G27 269 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 NMUR1Q9HB89 426 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 KPNA3O00505 521 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 WNT1P04628 370 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 RBMS1P29558 406 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC11A2P49281 568 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 MS4A13Q5J8X5 152 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 HES5Q5TA89 166 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 NHLRC1Q6VVB1 395 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 MSANTD1Q6ZTZ1 278 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 UBE2R2Q712K3 238 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 SPATA2LQ8IUW3 424 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR6S1Q8NH40 331 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 MIOXQ9UGB7 285 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 RCE1Q9Y256 329 aa9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 RUVBL1Q9Y265 456 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-208ENST00000615468 HHLA1C9JL84 531 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 FMO6PO60774 539 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 IGF2P01344 180 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 UCHL1P09936 223 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 RAD52P43351 418 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 HBA1P69905 142 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MLLT1Q03111 559 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC3A1Q07837 685 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SERINC3Q13530 473 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 METTL11BQ5VVY1 283 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 GLB1LQ6UWU2 654 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ZNF280BQ86YH2 543 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 RBM45Q8IUH3 476 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 GCDHQ92947 438 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 FNDC11Q9BVV2 318 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SF3B6Q9Y3B4 125 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 PCDHB1Q9Y5F3 818 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC22A7Q9Y694 548 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ARID1AO14497 2285 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ABHD14A-ACY1A0A1B0GW23 586 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 UBE2QL1A1L167 161 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC9B1P1A6NJY1 282 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 CREBL2O60519 120 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 PRAMEF2O60811 474 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SCN2BO60939 215 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SOX30O94993 753 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 HLA-FP30511 346 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 HOXC13P31276 330 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 RAP2BP61225 183 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MAP4K2Q12851 820 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 BOP1Q14137 746 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 C10orf120Q5SQS8 335 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC22A10Q63ZE4 541 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 HBMQ6B0K9 141 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 RBMS3Q6XE24 437 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 DNAJB7Q7Z6W7 309 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 IQCHQ86VS3 1027 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SERPINA12Q8IW75 414 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 CHCHD4Q8N4Q1 142 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 FBXO15Q8NCQ5 510 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 OR1S1Q8NH92 325 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 WDR89Q96FK6 387 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MED8Q96G25 268 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SCLYQ96I15 445 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SEMA4CQ9C0C4 833 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 GPN1Q9HCN4 374 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 CA10Q9NS85 328 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 GULP1Q9UBP9 304 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 TINAGQ9UJW2 476 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 LRFN2Q9ULH4 789 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 AP1M2Q9Y6Q5 423 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SIP14410 1827 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SYNDIG1LA6NDD5 238 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ANKRD66B4E2M5 251 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SMAD9O15198 467 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 INSIG1O15503 277 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SUSD5O60279 629 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 EFCAB14O75071 495 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 BCHEP06276 602 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 EPHX1P07099 455 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ANKRD34CP0C6C1 535 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 ACP2P11117 423 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 HOXB9P17482 250 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 SLC1A3P43003 542 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 CACNG1Q06432 222 aa9.76□□□□□ -0.85
TNFAIP3-208ENST00000615468 MTAPQ13126 283 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms