RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 GPR39O43194 453 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 SH3BP5O60239 455 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 TAS2R38P59533 333 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 CDK6Q00534 326 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 PTSQ03393 145 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 RPA4Q13156 261 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 SNAPC1Q16533 368 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 TMEM81Q6P7N7 255 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 CEACAM20Q6UY09 585 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 OR11H7Q8NGC8 314 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 HUS1BQ8NHY5 278 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 TMEM203Q969S6 136 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 NXPE2Q96DL1 559 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 LYSMD1Q96S90 227 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 WACQ9BTA9 647 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 SLCO1C1Q9NYB5 712 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 ZNF222Q9UK12 451 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 EXOSC1Q9Y3B2 195 aaKnown RBP20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 NUBP2Q9Y5Y2 271 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 TRBC2A0A5B9 178 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 K7ESF4 209 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 HRO43593 1189 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 APBB3O95704 486 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 SOD1P00441 154 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 ETFAP13804 333 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 IDSP22304 550 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 ETV5P41161 510 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 NFATC2Q13469 925 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 FAM151BQ6UXP7 276 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 RFLNAQ6ZTI6 216 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 OTULINQ96BN8 352 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 TEFMQ96QE5 360 aaKnown RBP20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 DPCDQ9BVM2 203 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 ASB8Q9H765 288 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 C1GALT1Q9NS00 363 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 COQ3Q9NZJ6 369 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 MALT1Q9UDY8 824 aa20.6■□□□□ 0.89
POLR2J3-220ENST00000613744 ZNF106Q9H2Y7 1883 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 GAPDHSO14556 408 aaPredicted RBP20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 C4BPBP20851 252 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 VIPR1P32241 457 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 RAG2P55895 527 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 FGFBP1Q14512 234 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 GPR33Q49SQ1 333 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 ABI3BPQ7Z7G0 1075 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 TCEANCQ8N8B7 351 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 OTUB1Q96FW1 271 aaPredicted RBP20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 PDXPQ96GD0 296 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 RBP7Q96R05 134 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 BRF2Q9HAW0 419 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 GPATCH2Q9NW75 528 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 ATP6V1HQ9UI12 483 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 CD84Q9UIB8 345 aa20.59■□□□□ 0.89
POLR2J3-220ENST00000613744 NUP214P35658 2090 aaPredicted RBP20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 CASC3O15234 703 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 ARAFP10398 606 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 PEPDP12955 493 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 GALP22466 123 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 ACSL1P33121 698 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 RAB40BQ12829 278 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 GANABQ14697 944 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 OR11H4Q8NGC9 324 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 KLHL15Q96M94 604 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 OR51J1Q9H342 316 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 UCKL1Q9NWZ5 548 aa20.58■□□□□ 0.89
POLR2J3-220ENST00000613744 hCG_1807616A0A1W2PRN6 198 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 SLC16A5O15375 505 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 MMP20O60882 483 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 PSIP1O75475 530 aaKnown RBP20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 PCDH8O95206 1070 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 HIST1H2AGP0C0S8 130 aaPredicted RBP20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 HIST1H2ADP20671 130 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 MMP12P39900 470 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 B2MP61769 119 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 FABP5Q01469 135 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 LGALSLQ3ZCW2 172 aaPredicted RBP20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 SYT14Q8NB59 555 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 SRFBP1Q8NEF9 429 aaKnown RBP20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 WDR20Q8TBZ3 569 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 RFT1Q96AA3 541 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 HIST1H2AHQ96KK5 128 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 HIST1H2AJQ99878 128 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 H2AFJQ9BTM1 129 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 SLC7A5P2Q9GIP4 190 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 HDHD2Q9H0R4 259 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 COPZ2Q9P299 210 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 SESN1Q9Y6P5 492 aa20.58■□□□□ 0.88
POLR2J3-220ENST00000613744 LAMTOR5O43504 91 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 AKAP8O43823 692 aaKnown RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 ELFN1P0C7U0 828 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 ADPRHP54922 357 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 CHIT1Q13231 466 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 SP140Q13342 867 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 COX20Q5RI15 118 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 BCL2L15Q5TBC7 163 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 TMIGD1Q6UXZ0 262 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 UBE2R2Q712K3 238 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 HSD11B1LQ7Z5J1 315 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 CLDN19Q8N6F1 224 aa20.57■□□□□ 0.88
POLR2J3-220ENST00000613744 DPAGT1Q9H3H5 408 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms