RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ATG4BQ9Y4P1 393 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 WASHC1A8K0Z3 465 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 PGRMC2O15173 223 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 DYRK3O43781 588 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 PRKRAO75569 313 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 CASP3P42574 277 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 RAB40BQ12829 278 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 WASH2PQ6VEQ5 465 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 KIF18BQ86Y91 864 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 IL17RDQ8NFM7 739 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 OR8K5Q8NH50 307 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 TMEM163Q8TC26 289 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 LCN9Q8WX39 176 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 SLC25A46Q96AG3 418 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ARHGDIGQ99819 225 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ERVK13-1Q9NX77 482 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 TBC1D24Q9ULP9 559 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ENTPD4Q9Y227 616 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 DNAH14Q0VDD8 3507 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 LRP4O75096 1905 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 A0A1W2PPC4 97 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 GLOD5A6NK44 160 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SNTNA6NMZ2 147 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 PRODHO43272 600 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 AIFM1O95831 613 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ACP2P11117 423 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 S100A1P23297 94 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 IFNGR2P38484 337 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ETV5P41161 510 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 BUD31P41223 144 aaPredicted RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 ETV1P50549 477 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 WNT4P56705 351 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 PRR5P85299 388 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 RUNX1T1Q06455 604 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 TMPRSS11AQ6ZMR5 421 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 OLIG3Q7RTU3 272 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 FAM181AQ8N9Y4 354 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SRFBP1Q8NEF9 429 aaKnown RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 OR4E2Q8NGC2 313 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 KLHDC7BQ96G42 594 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ANKRD19PQ9H560 264 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 KIR3DX1Q9H7L2 352 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 TXNL4BQ9NX01 149 aaKnown RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 A0A087WUU8 490 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 C10orf142B7Z368 130 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 WWP2O00308 870 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 EMC8O43402 210 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 F3P13726 295 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 MYL12AP19105 171 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 CSNK2A2P19784 350 aaPredicted RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 MAGP20916 626 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 NDUFS1P28331 727 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 NUDT1P36639 197 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 PRKAG1P54619 331 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDH1-213ENST00000612417 DUSP2Q05923 314 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SLC27A4Q6P1M0 643 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SLC36A4Q6YBV0 504 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 TRIM48Q8IWZ4 208 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 FAM20CQ8IXL6 584 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 OR2L3Q8NG85 312 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 TEX47Q8TBZ9 253 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 GNPDA2Q8TDQ7 276 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 GPR151Q8TDV0 419 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 MED18Q9BUE0 208 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 PLA2G12AQ9BZM1 189 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 SLC38A1Q9H2H9 487 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 TCEAL2Q9H3H9 227 aaPredicted RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 SNTG1Q9NSN8 517 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 C14orf119Q9NWQ9 140 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 CALML5Q9NZT1 146 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ZNF624Q9P2J8 865 aaPredicted RBP13.75□□□□□ -0.21
CDH1-213ENST00000612417 LIPT1Q9Y234 373 aa13.75□□□□□ -0.21
CDH1-213ENST00000612417 ABCA7Q8IZY2 2146 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 RGS5O15539 181 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 UBXN7O94888 489 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 CTSEP14091 401 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 TSPAN31Q12999 210 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 TPBGQ13641 420 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 ZNF79Q15937 498 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 MINDY4Q4G0A6 757 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 FLYWCH1Q4VC44 716 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 GPAT3Q53EU6 434 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 AGAP6Q5VW22 663 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 TMEM107Q6UX40 140 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 RASSF6Q6ZTQ3 369 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 AMIGO1Q86WK6 493 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 NRROSQ86YC3 692 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 LAX1Q8IWV1 398 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
CDH1-213ENST00000612417 DIO2Q92813 273 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms