RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 KCNJ16Q9NPI9 418 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 THAP1Q9NVV9 213 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 CAMK2AQ9UQM7 478 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 ITM2AO43736 263 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SCO2O43819 266 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 IL33O95760 270 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 IL2RAP01589 272 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 LBPP18428 481 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 COL8A1P27658 744 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 LCN1P31025 176 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SRD5A2P31213 254 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SOAT1P35610 550 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 FRKP42685 505 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 ZFP36L2P47974 494 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 CLNS1AP54105 237 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 GAB1Q13480 694 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 CASP8Q14790 479 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 PTGR1Q14914 329 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 DPY19L1Q2PZI1 675 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 PGS1Q32NB8 556 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 FAM83FQ8NEG4 500 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 OR7A2PQ8NGA2 310 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 ABTB1Q969K4 478 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 DUSP26Q9BV47 211 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 UBQLN3Q9H347 655 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 TMBIM4Q9HC24 238 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SERHLQ9NQF3 203 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 FAM120CQ9NX05 1096 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 ASIC5Q9NY37 505 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 TAS2R10Q9NYW0 307 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
CBWD3-208ENST00000612050 SPTBN1Q01082 2364 aaKnown RBP11.25□□□□□ -0.61
CBWD3-208ENST00000612050 HSPB2A8KAH6 182 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 SCDO00767 359 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 PSMG1O95456 288 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 G6PDP11413 515 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 CYP4B1P13584 511 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 SOX18P35713 384 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 CCT3P49368 545 aaKnown RBP11.25□□□□□ -0.61
CBWD3-208ENST00000612050 DSCR4P56555 118 aaPredicted RBP11.25□□□□□ -0.61
CBWD3-208ENST00000612050 CLDN8P56748 225 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 NUP107P57740 925 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 C17orf67Q0P5P2 114 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 BST1Q10588 318 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 HSPB2Q16082 182 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF385BQ569K4 471 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 AGBL2Q5U5Z8 902 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ANXA8L1Q5VT79 327 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 YRDCQ86U90 279 aaKnown RBP11.25□□□□□ -0.61
CBWD3-208ENST00000612050 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF527Q8NB42 609 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 OR4N2Q8NGD1 307 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ADAMTS15Q8TE58 950 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ZBTB9Q96C00 473 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 SFXN2Q96NB2 322 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 ZBTB18Q99592 522 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 TTYH2Q9BSA4 534 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 NUF2Q9BZD4 464 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 MANSC1Q9H8J5 431 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 AKTIPQ9H8T0 292 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 TNFRSF10DQ9UBN6 386 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 GIMAP2Q9UG22 337 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 RNF6Q9Y252 685 aa11.25□□□□□ -0.61
CBWD3-208ENST00000612050 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 DUXAA6NLW8 204 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 H0Y3Z8 333 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 H3BNH8 94 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 LINC01387J3KSC0 135 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 DVL2O14641 736 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ADAM10O14672 748 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 NKX2-2O95096 273 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 LAMP1P11279 417 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 DPP4P27487 766 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 ARRB2P32121 409 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 EEFSECP57772 596 aaKnown RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 POU6F2P78424 691 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 CRYZQ08257 329 aaKnown RBP11.24□□□□□ -0.61
CBWD3-208ENST00000612050 STX5Q13190 355 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 EIPR1Q53HC9 387 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 RIPPLY2Q5TAB7 128 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 VASNQ6EMK4 673 aa11.24□□□□□ -0.61
CBWD3-208ENST00000612050 MFSD12Q6NUT3 480 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms