RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CD300CQ08708 224 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 TSPAN31Q12999 210 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 MINDY4Q4G0A6 757 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 TMEM52BQ4KMG9 183 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 RTL10Q7L3V2 364 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 LINGO2Q7L985 606 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 VWA5B2Q8N398 1253 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 CYB561A3Q8NBI2 242 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 OR52I1Q8NGK6 324 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 HMGB4Q8WW32 186 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SPRYD4Q8WW59 207 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 WDR92Q96MX6 357 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 APOOQ9BUR5 198 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 AKAP7Q9P0M2 348 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 NFKBIL1Q9UBC1 381 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 NPIPA5A0A0B4J1W7 369 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 CXorf51AA0A1B0GTR3 108 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 A0A1W2PRG6 482 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 NPIPA7E9PJI5 369 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 KIAA0355O15063 1070 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 PPM1DO15297 605 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 HOXC11O43248 304 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 LCMT2O60294 686 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 DPM1O60762 260 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 CDC123O75794 336 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 ARL6IP5O75915 188 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 NPIPA8P0DM63 369 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ALAS2P22557 587 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 EDNRAP25101 427 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SLC6A6P31641 620 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 GJA4P35212 333 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 BSGP35613 385 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 DPTQ07507 201 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 LTB4RQ15722 352 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 NNATQ16517 81 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ZXDCQ2QGD7 858 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 GDPD3Q7L5L3 318 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 Q8N9G6 341 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 MRGPRX3Q96LB0 322 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ERMAPQ96PL5 475 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 LGR4Q9BXB1 951 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ABCG5Q9H222 651 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 RNF121Q9H920 327 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 RMI1Q9H9A7 625 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 DIMT1Q9UNQ2 313 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 NYNRINQ9P2P1 1898 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 GRXCR1A8MXD5 290 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 EEF1E1O43324 174 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 SLC19A2O60779 497 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SLC25A12O75746 678 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 KLF8O95600 359 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 CA3P07451 260 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 BCL6P41182 706 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 TEKQ02763 1124 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SEC23BQ15437 767 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 FCRLBQ6BAA4 426 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ACSM5Q6NUN0 579 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 FIGLAQ6QHK4 219 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 ZER1Q7Z7L7 766 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 PHC2Q8IXK0 858 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SLC44A3Q8N4M1 653 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 MEIOBQ8N635 442 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 SFXN5Q8TD22 340 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 PIGKQ92643 395 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 RFT1Q96AA3 541 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 RSPH9Q9H1X1 276 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 KLHL31Q9H511 634 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 MBNL1Q9NR56 388 aaKnown RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 CXXC1Q9P0U4 656 aaPredicted RBP8.16□□□□□ -1.1
LIG4-204ENST00000611712 GNG8Q9UK08 70 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 PLEKHM1Q9Y4G2 1056 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
LIG4-204ENST00000611712 A0A075B6Q4 140 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 A0A1W2PRQ8 180 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 HYKKA2RU49 373 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 FAM172BPA6NC97 362 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 LRIT2A6NDA9 550 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 SLC22A31A6NKX4 558 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 GPR89AB7ZAQ6 455 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 HPGDSO60760 199 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 COQ9O75208 318 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 RPP14O95059 124 aaKnown RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 DBIP07108 87 aaKnown RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 GPR89BP0CG08 455 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 NAA10P41227 235 aaPredicted RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 TAS2R43P59537 309 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 SHC2P98077 582 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ENPP2Q13822 863 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 PAMR1Q6UXH9 720 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 NLRP8Q86W28 1048 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 NANOGP1Q8N7R0 232 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 OR2L8Q8NGY9 312 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 NAALAD2Q9Y3Q0 740 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 N6AMT1Q9Y5N5 214 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ELOA3DA6NLF2 546 aaPredicted RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 NPIPB8E9PQR5 432 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 RGS9O75916 674 aaPredicted RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 INHBBP09529 407 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms