RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 COQ9O75208 318 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 GLRA3O75311 464 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 SEC22BO75396 215 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 TNFSF13O75888 250 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 RSL1D1O76021 490 aaKnown RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 SLITRK5O94991 958 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 GOSR1O95249 250 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 PSMG1O95456 288 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 SHBGP04278 402 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 UROSP10746 265 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 PEPDP12955 493 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 KLK2P20151 261 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 TCEA1P23193 301 aaKnown RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 EVI2BP34910 448 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 MC3RP41968 323 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CCT5P48643 541 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CLDN15P56746 228 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 ADAM8P78325 824 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 ZNF155Q12901 538 aaPredicted RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 KIAA0040Q15053 153 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 DECR1Q16698 335 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 IMPG1Q17R60 797 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CCDC153Q494R4 210 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CFAP157Q5JU67 520 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 NOXRED1Q6NXP6 359 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 TMEM107Q6UX40 140 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 FRMD7Q6ZUT3 714 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 GRAMD2AQ8IUY3 354 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 GCNT2Q8N0V5 402 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 OR2M3Q8NG83 312 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 OR4K17Q8NGC6 315 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CDC26Q8NHZ8 85 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 DUSP19Q8WTR2 217 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 EGLN2Q96KS0 407 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 AMDHD1Q96NU7 426 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 ALPK1Q96QP1 1244 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 C12orf65Q9H3J6 166 aaKnown RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 PIGMQ9H3S5 423 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 MIEF1Q9NQG6 463 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 RRAGDQ9NQL2 400 aaPredicted RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 SDHAF3Q9NRP4 125 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 FLRT3Q9NZU0 649 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 PPP4R1LQ9P1A2 415 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 ZNF337Q9Y3M9 751 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 CCL27Q9Y4X3 112 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 POLR3HQ9Y535 204 aaPredicted RBP6.89□□□□□ -1.31
CUX1-219ENST00000606749 MED12LQ86YW9 2145 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 PCNX3Q9H6A9 2034 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 A0A1W2PNV4 684 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 A0A1W2PPR1 153 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 SH3D21A4FU49 640 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 H0YC42 278 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 SLC28A1O00337 649 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 MSTNO14793 375 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CASKO14936 926 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 SCO2O43819 266 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 DIAPH2O60879 1101 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CRCPO75575 148 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 ATE1O95260 518 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 IL33O95760 270 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 RAF1P04049 648 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 HRGP04196 525 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CRHP06850 196 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CPA3P15088 417 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 HK1P19367 917 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 PRPH2P23942 346 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 NTSP30990 170 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 GABRA3P34903 492 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CRHR1P34998 444 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 KIR2DL2P43627 348 aaPredicted RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 CPA2P48052 419 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 SUCLG1P53597 346 aaKnown RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 DIO3P55073 304 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 TPD52P55327 224 aaPredicted RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 PPP2R2AP63151 447 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 FAM27E3Q08E93 113 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 GANABQ14697 944 aaKnown RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 DEFB113Q30KQ7 82 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 GLYR1Q49A26 553 aaPredicted RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 CLEC6AQ6EIG7 209 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 PAMR1Q6UXH9 720 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 APOOLQ6UXV4 268 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 Q6ZSR9 355 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 IKBIPQ70UQ0 350 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 CHMP1BQ7LBR1 199 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 ZNF551Q7Z340 670 aaPredicted RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 P4HA3Q7Z4N8 544 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 BTLAQ7Z6A9 289 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 MARCH3Q86UD3 253 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 TDRPQ86YL5 185 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 GSPT2Q8IYD1 628 aaKnown RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 UBQLNLQ8IYU4 475 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 EIF1ADQ8N9N8 165 aaKnown RBP6.88□□□□□ -1.31
CUX1-219ENST00000606749 OR5M1Q8NGP8 315 aa6.88□□□□□ -1.31
CUX1-219ENST00000606749 HOXB13Q92826 284 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms