RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 RUBCNLQ9H714 662 aa18.86■□□□□ 0.61
PNKP-215ENST00000600910 ELOVL7A1L3X0 281 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 REM1O75628 298 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 SORBS2O94875 1100 aaKnown RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 H6PDO95479 791 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ALPPP05187 535 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 CHRM4P08173 479 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 MSX2P35548 267 aaPredicted RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 KRT20P35900 424 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 SSR4P51571 173 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 CRISP3P54108 245 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 HPCAP84074 193 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 SPATS1Q496A3 300 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ABHD17BQ5VST6 288 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 AGAP7PQ5VUJ5 663 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ERICH5Q6P6B1 374 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 LYPD8Q6UX82 237 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 MICU2Q8IYU8 434 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 BEST3Q8N1M1 668 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 FDCSPQ8NFU4 85 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 DIO2Q92813 273 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 AGAP4Q96P64 663 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 G6PC3Q9BUM1 346 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ZNF552Q9H707 407 aaPredicted RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 STMN3Q9NZ72 180 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 MRTO4Q9UKD2 239 aaKnown RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 C5orf58C9J3I9 102 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 TSPAN2O60636 221 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 FCMRO60667 390 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 IL33O95760 270 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 IL12BP29460 328 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 SOX3P41225 446 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 PSMD4P55036 377 aaKnown RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 GNA13Q14344 377 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 RPS26P11Q5JNZ5 115 aaPredicted RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 REEP3Q6NUK4 255 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ZAR1Q86SH2 424 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 HPS6Q86YV9 775 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 FBXW8Q8N3Y1 598 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 TMEM156Q8N614 296 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 METTL25Q8N6Q8 603 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 SNRNP27Q8WVK2 155 aaKnown RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 ASB15Q8WXK1 588 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ADOQ96SZ5 270 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ZNF350Q9GZX5 532 aa18.85■□□□□ 0.61
PNKP-215ENST00000600910 ZBTB20Q9HC78 741 aaPredicted RBP18.85■□□□□ 0.61
PNKP-215ENST00000600910 STX11O75558 287 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 PPM1BO75688 479 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 CEACAM4O75871 244 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 OR6B1O95007 311 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 ZIC2O95409 532 aaPredicted RBP18.84■□□□□ 0.61
PNKP-215ENST00000600910 ATP6V1C1P21283 382 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 HTR1EP28566 365 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 PCGF2P35227 344 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 CHRNEQ04844 493 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.84■□□□□ 0.61
PNKP-215ENST00000600910 BORAQ6PGQ7 559 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 OPN5Q6U736 354 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 ISLR2Q6UXK2 745 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 LRRC74BQ6ZQY2 392 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 LINC00696Q6ZRV3 163 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 ULK2Q8IYT8 1036 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 HIPK4Q8NE63 616 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 TREX2Q9BQ50 279 aaPredicted RBP18.84■□□□□ 0.61
PNKP-215ENST00000600910 SLC38A1Q9H2H9 487 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 CALML5Q9NZT1 146 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 EGFL7Q9UHF1 273 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 MKLN1Q9UL63 735 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 ANGPT4Q9Y264 503 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 WDR45Q9Y484 360 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 MGAQ8IWI9 3026 aa18.84■□□□□ 0.61
PNKP-215ENST00000600910 PTPRQQ9UMZ3 2332 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 FBXO45P0C2W1 286 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 NAGAP17050 411 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 ME2P23368 584 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 AQP1P29972 269 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 TMED10P49755 219 aaKnown RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 PNLIPRP2P54317 469 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 FBXW4P57775 412 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 FOXK2Q01167 660 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 VEZF1Q14119 521 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 ZNF468Q5VIY5 522 aaPredicted RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 DESI1Q6ICB0 168 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 TYW3Q6IPR3 259 aaKnown RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 PGM2L1Q6PCE3 622 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 FRRS1Q6ZNA5 592 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 TNIP2Q8NFZ5 429 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 OR5M3Q8NGP4 307 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 CCDC124Q96CT7 223 aaKnown RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 SPACA9Q96E40 222 aaPredicted RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 COL21A1Q96P44 957 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 MMADHCQ9H3L0 296 aaPredicted RBP18.83■□□□□ 0.61
PNKP-215ENST00000600910 ABI3Q9P2A4 366 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 ZMIZ1Q9ULJ6 1067 aa18.83■□□□□ 0.61
PNKP-215ENST00000600910 CPAMD8Q8IZJ3 1885 aa18.83■□□□□ 0.6
PNKP-215ENST00000600910 OR6C70A6NIJ9 312 aa18.82■□□□□ 0.6
PNKP-215ENST00000600910 GSTA4O15217 222 aa18.82■□□□□ 0.6
PNKP-215ENST00000600910 UGT2B11O75310 529 aa18.82■□□□□ 0.6
PNKP-215ENST00000600910 PGM3O95394 542 aa18.82■□□□□ 0.6
PNKP-215ENST00000600910 GPR68Q15743 365 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms